Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2168 |
Symbol | tpiA |
ID | 6177654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2417794 |
End bp | 2418549 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681941 |
Product | triosephosphate isomerase |
Protein accession | YP_001808863 |
Protein GI | 172061211 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00524142 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC AACGAACAAA GCGAGTGATC GGCAACTGGA AGATGCACGG CCGGCTGGCC GGCAACCAGG CGTTGCTGAA TGAAGTGGTG CAGGGCGCGG GCGCGGTGGC CGCTGAAACG TCGATCGGCG TGTGCGTGCC GTTTCCGTAC CTCGCGCAGG TTCAGGCGCA GCTCGGCGCT GGCCGTGTCG TGTTCGGCGC GCAGGACGTG TCCGCGCACG AGCAGGGCGC GTTCACCGGC GAAGTCGCTG CGGCGATGGT GGCGGAGTTC GGTGCGCATT ATGCGATCGT CGGTCACTCG GAGCGTCGTG CGTATCACGG CGAGCGCAAC GAGACCGTCG CGGCGAAGAC GCAGCGCGCG CTCGCGGCAG GCCTCACGCC CGTCGTGTGC GTCGGCGAAA CGCTCGACGA GCGTGAAGCG GGCGCGACCG AGCAGGTGGT CGGTGCGCAG CTCGACGCCG TGCTGGCCGT GCTGACGGCT GACGAGGCTG CTCGCATCGT CGTCGCGTAC GAGCCGGTCT GGGCGATCGG CACCGGCAAG AGCGCGACGT CGGCGCAGGC GCAGGATGTG CACGCATTCC TGCGTGCGCG TCTCGCGGCG AAGGGTGCGG CGCACGTCTC GGTGCTGTAC GGCGGCAGCG TGAAGCCGGA CAACGCGGAA GAGCTGTTCG CGCAGCCGGA CATCGACGGC GGCCTGATCG GCGGCGCGTC GCTGAAGGCG CAAGATTTCC TGGCGATCTG CCGGGCCGCA CGTTGA
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Protein sequence | MSKQRTKRVI GNWKMHGRLA GNQALLNEVV QGAGAVAAET SIGVCVPFPY LAQVQAQLGA GRVVFGAQDV SAHEQGAFTG EVAAAMVAEF GAHYAIVGHS ERRAYHGERN ETVAAKTQRA LAAGLTPVVC VGETLDEREA GATEQVVGAQ LDAVLAVLTA DEAARIVVAY EPVWAIGTGK SATSAQAQDV HAFLRARLAA KGAAHVSVLY GGSVKPDNAE ELFAQPDIDG GLIGGASLKA QDFLAICRAA R
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