Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2163 |
Symbol | |
ID | 6176354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2414205 |
End bp | 2415458 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641681935 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_001808858 |
Protein GI | 172061206 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.549103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA TCAAGAACTA CACCCTCAAC TTCGGCCCGC AGCACCCGGC AGCGCACGGC GTGCTGCGCC TGGTGCTCGA GCTGGACGGC GAAGTCATCC AGCGCGCCGA TCCGCACATC GGCCTGCTGC ACCGCGCGAC TGAAAAGCTC GCGGAAAACA AGACCTTCAT CCAGTCCGTG CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTCA ACGAGCACGG CTATGTGCTC GCGATCGAGC GTCTGCTCGG CATCGACGTG CCCGAGCGCG CGCAGTACAT CCGCGTGCTG TTCGACGAAA TCACGCGCGT GCTGAACCAC CTGATGTGGA TCGGCGCGCA CGCACTCGAC GTCGGCGCGA TGGCGGTGTT CCTGTACGCA TTCCGCGAGC GTGAAGACCT GATGGACGTG TACGAAGCGG TGTCCGGCGC ACGGATGCAC GCGGCGTACT ACCGTCCCGG CGGTGTCTAT CGCGACCTGC CTGACGCAAT GCCGCAATAC AAGGCGTCGA AGATTCGCAA CGAGAAGGCG CTCGCGAAGA TGAACGAAGC GCGCAGCGGC TCGGTGCTCG ACTTCATCGA CGACTTCTTC ACGCGCTTCC CGAAGTGCGT CGACGAATAC GAAACGCTGC TGACCGACAA CCGGATCTGG AAACAGCGTC TGGTCGGGAT CGGTGTCGTC AGCCCGGAAC GCGCGCTGCA GATGGGCCTG ACGGGCCCGA TGCTGCGCGG TTCGGGTATC GCGTGGGATC TGCGCAAGAA GCAGCCGTAC GAAGTGTACG ACCGCATGGA TTTCGACGTG CCGGTCGGCG TGAACGGCGA CTGCTACGAC CGCTATCTGG TGCGCGTCGA AGAAATGCGC CAATCGATCC GCATCGCGAA ACAGTGTATT GAGTGGCTCC GCAAGAATCC GGGCCCGGTG ATGACGGACA ATCACAAGGT TGCACCGCCG TCGCGCGTCG GCATGAAGAC CAACATGGAA GACTTGATTC ACCACTTCAA GCTCTTCACC GAAGGTTTTC ACGTGCCGGA AGGCGAGGCG TACGCAGCAG TCGAGCATCC GAAGGGCGAA TTCGGCATCT ACCTCGTGTC GGACGGTGCC AACAAGCCGT ATCGCCTCAA GATTCGCGCC CCGGGCTTCG CGCATCTCGC GTCGCTCGAC GAAATGGCGC GCGGCCACAT GATTGCCGAC GCCGTCACGA TCATCGGTAC GCAGGACATC GTGTTCGGCG AAATCGATCG CTAA
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Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AENKTFIQSV PYMDRLDYVS MMVNEHGYVL AIERLLGIDV PERAQYIRVL FDEITRVLNH LMWIGAHALD VGAMAVFLYA FREREDLMDV YEAVSGARMH AAYYRPGGVY RDLPDAMPQY KASKIRNEKA LAKMNEARSG SVLDFIDDFF TRFPKCVDEY ETLLTDNRIW KQRLVGIGVV SPERALQMGL TGPMLRGSGI AWDLRKKQPY EVYDRMDFDV PVGVNGDCYD RYLVRVEEMR QSIRIAKQCI EWLRKNPGPV MTDNHKVAPP SRVGMKTNME DLIHHFKLFT EGFHVPEGEA YAAVEHPKGE FGIYLVSDGA NKPYRLKIRA PGFAHLASLD EMARGHMIAD AVTIIGTQDI VFGEIDR
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