| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2162 |
|---|
| Symbol | |
|---|
| ID | 6176347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2413551 |
|---|
| End bp | 2414036 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641681934 |
|---|
| Product | NADH dehydrogenase subunit E |
|---|
| Protein accession | YP_001808857 |
|---|
| Protein GI | 172061205 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCAG CTGAAGGCCT GAAGGAAATC GATCGAGCGT TGACGAAGTA TCCCGCCGAT
CAGAAACAGT CCGCCGTGAT GTCGGCGTTG GCCGTTGCTC AGGAAGAGCA CGGCTGGCTG
TCGCCCGAAC TGATGCAGTT CGTCGCGGAC TATCTCGGCA TGCCGGCAGT CGCCGTGCAG
GAAGTCGCGA CGTTCTACAC GATGTACGAG CTCAACCCGG TCGGCAAGCA CAAGATCACG
CTCTGCACGA ACCTCCCGTG CCAGCTTGGT CCGCACGGCG GCGCCGAGGC GACGGCCGAC
TACCTGAAAC AGAAGCTGGG CATCGGCTTC GGCGAGACCA CGCCCGACGG CAAGTTCACG
CTGAAGGAAG GCGAATGCAT GGGCTCGTGC GGCGATGCGC CGGTGCTGCT GGTGAACAAT
CACAGAATGT GCAGCTTCAT GAGCCGCGAG AAGATCGACC AGCTGCTTGA GGAGCTTTCG
AAATGA
|
|---|
| Protein sequence | MISAEGLKEI DRALTKYPAD QKQSAVMSAL AVAQEEHGWL SPELMQFVAD YLGMPAVAVQ
EVATFYTMYE LNPVGKHKIT LCTNLPCQLG PHGGAEATAD YLKQKLGIGF GETTPDGKFT
LKEGECMGSC GDAPVLLVNN HRMCSFMSRE KIDQLLEELS K
|
|---|
| |