| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2057 |
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| Symbol | |
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| ID | 6175968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2296143 |
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| End bp | 2297669 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681824 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001808754 |
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| Protein GI | 172061102 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAC CAATCGATCC GCTGGGTGCT CGAAAAGGCA
CTCGCCCGGG ACAGCTTCGC GACGAAGAGT TTCGCGAACG TGCGCGACGC GCTGGCCGCG
CTCGACCACG AGACGCCGCA GGTGCTCGTA TCCGACATCC GGATGCCGGG CGGCTCCGGC
CTCGAATTGC TGCAGGCGGT GCACGAGCGT CTGCCGGACC TGCCCGTCAT CATCATGACG
GCGTTCTCCG ATCTCGACAG CGCCGTCGCG GCGTTCCAGG GCGGCGCGTT CGAATATCTC
GCGAAGCCGT TCGACGTCGA CAAGGCGGTG GAGCTGATCC GCCGCGCGGT CGAGGAAAGC
CTGCGCGGCG GCGCGCCGCA GGACGAGCGC GTGGCCGAAG CGCCCGAGAT GCTCGGCCAG
GCGCCCGCGA TGCAGGACAT GTTCCGCGCG ATCGGCCGCC TGTCGCATTC GGCCGCGACC
GTGCTGATCA CCGGCGAATC GGGCACCGGC AAGGAGCTCG TCGCGCGGGC GCTGCACCGG
CACAGCCCGC GCGCGAACGG ACCGTTCATC GCGCTGAACA CCGCGGCGAT TCCGAAGGAC
CTGCTCGAAT CCGAACTGTT CGGTCATGAA CGCGGCGCGT TCACCGGCGC GCAGACGACC
CGCCAGGGCC GCTTCGAACA GGCCGAGAAC GGCACGCTGT TCCTCGACGA AATCGGCGAC
ATGCCGTTCG ACCTGCAGAC ACGCCTGTTG CGCGTGCTGT CGGACGGGCA GTTCTATCGC
GTGGGCGGCC ACAACCCGCT GCGCGCGAAC GTGCGCGTGA TCGCCGCGAC GCACCAGAAT
CTCGAGGCGC GCGTGCGGCA GGGGCTGTTC CGCGAGGATC TTTATCACCG GCTCAACGTG
ATCCGGCTGC GGCTGCCGCC GCTGCGCGAA CGCAGCGAGG ACATCGCGCT GCTCACGCGC
CACTTTCTGC AGAAGAGTGC GCGCGATCTC GGCGTCGAGC CCAAGCGCGT GTCCGACGAC
GCGCTGGCGT ACCTGACGTC GTTGTCGTTC CCCGGCAACG TGCGGCAGCT CGAGAATCTC
GCGAACTGGC TGACCGTGAT GGCGCCCGCG CAGACGGTCG AGATCAAGGA CCTGCCGCCC
GACCTCGTGC CGGCAGGCGC GCCGGTGACT GCAACGGCCG ATGGCATCGA TGCGCACGGC
GGCGCGGGCA TCGGCGGTGG CGACGCGCTG CGCGTGCCGC CGGCGGCCGG TACGGCGCCG
TTGACGGCGG CGCCCGTCGC GGCCGCGCCG AACGGCGCGC CGGCCGGCTA TCCGATGTGG
GAAAACGGGC TGCGCACCGA AGTCGCGCGG CTGTTGCGCG AGAACTCGGC CGACGTGATG
GACGAGCTCG CGCGCCGCTT CGAGGCGGCC GTGATCCGCG AGGCCCTCGA CTTCACGCGC
GGCCGCAAGG TCGAGGCGGC GGAGCGGCTC GGCATCGGCC GCAACACGAT CACGCGCAAG
ATCCAGGAAC TGCACCTGGA GCCTTGA
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| Protein sequence | MKPIWIVDDD QSIRWVLEKA LARDSFATKS FANVRDALAA LDHETPQVLV SDIRMPGGSG
LELLQAVHER LPDLPVIIMT AFSDLDSAVA AFQGGAFEYL AKPFDVDKAV ELIRRAVEES
LRGGAPQDER VAEAPEMLGQ APAMQDMFRA IGRLSHSAAT VLITGESGTG KELVARALHR
HSPRANGPFI ALNTAAIPKD LLESELFGHE RGAFTGAQTT RQGRFEQAEN GTLFLDEIGD
MPFDLQTRLL RVLSDGQFYR VGGHNPLRAN VRVIAATHQN LEARVRQGLF REDLYHRLNV
IRLRLPPLRE RSEDIALLTR HFLQKSARDL GVEPKRVSDD ALAYLTSLSF PGNVRQLENL
ANWLTVMAPA QTVEIKDLPP DLVPAGAPVT ATADGIDAHG GAGIGGGDAL RVPPAAGTAP
LTAAPVAAAP NGAPAGYPMW ENGLRTEVAR LLRENSADVM DELARRFEAA VIREALDFTR
GRKVEAAERL GIGRNTITRK IQELHLEP
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