Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2056 |
Symbol | |
ID | 6175961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2293952 |
End bp | 2296063 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641681823 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001808753 |
Protein GI | 172061101 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.273173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.9211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATT CCTTCCGCTG GCCCGCCGGG GCCGATCCCT TCCGTTTTCT CGAATCGCTC GACAGCAAGC GCGCCCGCGC GTGGGTCGAC GAGCAGAACG CGCGCACGCG TGTCGCGCTG CGCGACGACG ATGCGTATCG TGCGCTCACC GCGCGGCTCG CACAGGCGTA TCTGCCGCGC GAACGCCCGG TGATTCCGAC CCGCTGGCGC GAGTGGGCGT ACGACCTGTG GCAGGACGAT CTCCACCCGA AGGGATTATG GCGCCGCGCC CGCTGGGACG ACTGGCGCGC GGGCCGGCCC GAGTGGGAAA CGCTGCTCGA CGTCGACGCG CTCGGCGCGC AAGAGGGCGA GTCGTGGGTG TTCGAGCAGG ACGCGATCCT GTACCCGGAC GGCGATCGCG CGCTGCTGTC GCTGTCGCCG GGCGGCGCCG ACGCGGTTGT CGTGCGCGAG TTCGATCTCG TGCAGCGCTG TTTCGTCGAC GACGGGTTCA CGATCGACGA GCCCGGGCAT CACACGGTCG GCTGGATCGA CCGCGATACC GTCTACGTGA GCTGGGATCG CGGCGAAGCG CACGCGACCG CGGCCGGCTA CCCGTACGAC GCGCGCCGCT GGGTACGCGG CACGCCGCTT GTCGACGCGC CGGTCGTGTT TCGCGGCGAA CCCGACGACA TCAGCGCGGG CGCGGCGTTC GATCCGATCG ACGGCCGCCA CGTCGCGTGG CGCAGCGTCG ATTTTTTCGA CGCACACGCG TACTGGTTGA ACGACGCTGG CGAGTGGGTG CGCTACGACG TGCCGACACA TGTCGAGGTC GGCTTCTGGG AGGGCTGGCT CGTGCTGGAG CCGCGACTCG ACTGGGACTG CGGCGGCGTG CGTCACGCGG GCGGCTCGCT GCTCGCGATC CGCGAGCGGG CGTTCCTCGC CGGCGCGCGT GAGCTCACGA CGCTGTTCGA GCCGCGGCCG TCGACGTCCG CATGCACATG GACGCATACC CGCACGATGC TGATCGCGAG CTGGCTCGAC GACGTGCAAA ACCGCACGAT GCTGTGGCAG CCGCGCCAGG GCGAGGACGG CGCATGGACG TGGCACGCGC GGCCATTCGA GTGGCCGGGC GACGCGCAAG TCGACCTCGA GCCGGTCGAG TCGACGCTGA ACGACGATGT GTACGTCGAC GTCGACACCT ATCTCGATCC GCCCGAATGC TGGCTTGCCG ATCTGGCCGA TCGCGCGGAC GATGCCGCGT CGCGCCGCGT GCTGCTCGAC CGGCCGCCGG TGCGGTTCGA CGCGGCCGGG CTCGTCGTGC GTCGTGCCAA TGCCCGCTCG CGCGACGGCA CCGTGGTGCC GTATACGCTG ATCGGGCCGC GTGACGCACT CGATGGGCCC GATCACCCCG ATGGCGTCAC CCGCGTCGCG CGATCCTGCC TGATGTCAGG CTATGGCGGC TTCGCGATTC CGAACCTGCC GGGCTATAGC GATGCACTGG GCATCGCATG GCTCGAACGC GGCGGTGTCG CGGTGTTCGC GCACATCCGC GGCGGCGGCG AATTCGGGCC GGGCTGGCAC GTCGACGCGC AGCGCGAGCA TCGGCAGCGT GCGTTCGACG ACTTCATCGC GGTGGCCGAG GATCTGATCC GCAGCGGCGT GACCACGGCC GCGCAGCTCG GCATCGAGGG CGGCAGCAAC GGCGGGCTGC TGGTCGGCGC GTGCATGGTG CAGCGTCCGG AGCTGTTCGG CGCGGTGCTG TGCCGCGTAC CGCTGCTCGA CATGCGGCGA TATCCGAAGC TGCATGCGGG CGCCGCGTGG CTCGACGAAT ACGGCGATCC GGACGATTCG CGCGAGGGCG CGGCGCTGGC CGCCTATTCT CCGTATCACC GCGTGCGCGA AGGGGTCGTG TATCCGCCGC TGCTGCTGAC GACGTCGACG CGCGACGACC GCGTGCATCC CGCGCATGCG CGCAAAATGG CCGCGCGCAT GCATGCGCTC GGACACGAAC GGGTGTGGTA CTGGGAGAAC ACGGACGGTG GCCACGGCAG CGCCGACGAT CTGGAGCGTG CCGAAGCGGA TGCGGCGGAA TTCGGCTTCC TGTGGGCCCA TCTCGGGCCC GCGCGCGGTT GA
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Protein sequence | MSDSFRWPAG ADPFRFLESL DSKRARAWVD EQNARTRVAL RDDDAYRALT ARLAQAYLPR ERPVIPTRWR EWAYDLWQDD LHPKGLWRRA RWDDWRAGRP EWETLLDVDA LGAQEGESWV FEQDAILYPD GDRALLSLSP GGADAVVVRE FDLVQRCFVD DGFTIDEPGH HTVGWIDRDT VYVSWDRGEA HATAAGYPYD ARRWVRGTPL VDAPVVFRGE PDDISAGAAF DPIDGRHVAW RSVDFFDAHA YWLNDAGEWV RYDVPTHVEV GFWEGWLVLE PRLDWDCGGV RHAGGSLLAI RERAFLAGAR ELTTLFEPRP STSACTWTHT RTMLIASWLD DVQNRTMLWQ PRQGEDGAWT WHARPFEWPG DAQVDLEPVE STLNDDVYVD VDTYLDPPEC WLADLADRAD DAASRRVLLD RPPVRFDAAG LVVRRANARS RDGTVVPYTL IGPRDALDGP DHPDGVTRVA RSCLMSGYGG FAIPNLPGYS DALGIAWLER GGVAVFAHIR GGGEFGPGWH VDAQREHRQR AFDDFIAVAE DLIRSGVTTA AQLGIEGGSN GGLLVGACMV QRPELFGAVL CRVPLLDMRR YPKLHAGAAW LDEYGDPDDS REGAALAAYS PYHRVREGVV YPPLLLTTST RDDRVHPAHA RKMAARMHAL GHERVWYWEN TDGGHGSADD LERAEADAAE FGFLWAHLGP ARG
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