| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2047 |
|---|
| Symbol | aceE |
|---|
| ID | 6176334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2279989 |
|---|
| End bp | 2282685 |
|---|
| Gene Length | 2697 bp |
|---|
| Protein Length | 898 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641681813 |
|---|
| Product | pyruvate dehydrogenase subunit E1 |
|---|
| Protein accession | YP_001808744 |
|---|
| Protein GI | 172061092 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.709633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTG TACCGAACGA AGTGATGAAG TATGTCGCCG CCGAACGTGA CGACGACCCG
CAAGAAACCG TCGAGTGGCT CGAGTCGCTC GATGGCGTGA TCTCCTCCGT GGGCACCGGC
CGCGCGCACT ACCTGATCGA AAAGCAGATC GAGTTCGCCC GCATGCACGG CGAACACCTG
CCGTTCTCCG CCAACACCCC GTACATCAAC ACGATTCCCG TCGCCGCGCA GGCGAAGATC
CCGGGCGACC AGGACATCGA GCACCGCATT CGTTCGTACA CGCGCTGGAA CGCGCTGGCG
ATGGTGCTGC GCGCGGGCAA GGACACGAAC GTCGGCGGCC ACATCGCGTC GTTCGCGTCG
GCCGCGACGC TCTATGACGT CGGCTACAAC CACTTCTGGC ACGCGGCGTC CGACCAGCAC
GGCGGCGATC TCGTGTTCGT GCAGGGTCAC TCGTCGCCGG GCGTGTATTC GCGCGCGTTC
CTGCTCGGCC GCCTGTCGGA AGAGCAGCTC GACAACTTCC GCCAGGAAGT CGACGGCAAG
GGCATCTCGT CGTACCCGCA CCCGTGGCTG ATGCCGGACT TCTGGCAGTT CCCGACGGTG
TCGATGGGTC TCGGCCCGAT CATGGCGATC TACCAGGCCC GCTTCATGAA GTACCTGGAA
TCGCGCGGCA TCGCGAAGAC GGCCGGCCGC AAGGTCTGGG CGTTCCTCGG CGACGGCGAG
ACGGACGAGC CGGAATCGCT CGGCGCGATC GGCATGGCGA GCCGCGAGAA GCTCGACAAC
CTGGTGTTCG TGATCAACTG CAACCTGCAG CGTCTCGACG GTCCGGTGCG CGGCAACGGC
AAGATCATCC AGGAACTGGA ATCGGAATTC CGCGGTGCCG GCTGGAACGT GATCAAGGTC
ATTTGGGGCA GCCGCTGGGA TGCGCTGTTC GCACGCGACC AGACGGGCGC GCTGATGCGC
CGCATGATGG AAGTCGTCGA CGGCGAATAC CAGACGTACA AGTCGGAGTC GGGCGCGTTC
GTTCGCGAAC ACTTCTTCAA CACGCCTGAA CTGAAGGCGC TCGTCGCCGA CTGGTCGGAC
GACGACATCT GGGCGCTGAA CCGTGGCGGC CACGATCCGC ACAAGATCTA CGCGGCATTC
CACGAAGCGA CCAACACGAA GGGCGCGCCG ACCGTCATCC TCGCGAAGAC CATCAAGGGC
TACGGGATGG GCGAGTCGGG CCAGGCGATG AACATCACGC ACCAGCAGAA GAAGCTGCCG
GTCGAGCAAC TGAAGAAGTT CCGTGACCAG TTCCGCCTGC CGATCGCCGA CGAGCAGATC
GCCGACGTGC CGTACCTGAA GTTCGAGGAA GGCTCGAAGG AACTCGAATA CATGCGCCAG
AAGCGCATGG ACCTCGGCGG CTACCTGCCG CATCGCCGCG AAAAGGCGAC CTCGCTGCCG
GTGCCGGCGC TCGACGCGTT CGAGCCGCTG CTGAAGGGCA CGGGCGAAGG CCGCGAGATC
TCGACGACGA TGGCGTTCGT GCGGGTCCTG AACATCCTGT TGAAGGACAA GGCGCTCGGC
AAGCGCGTCG TGCCGATCGT CCCGGACGAA TCGCGTACGT TCGGCATGGA AGGCCTGTTC
CGCCAGATCG GTATCTGGAA CCAGGAAGGC CAGAAATACG TGCCGGAAGA TTCCGACCAG
CTGATGTTCT ACAAGGAATC GGAAACCGGC CAGATCCTGC AGGAAGGCAT CAACGAAGCG
GGCGGCATGT GCGACTGGAT CGCGGCGGCG ACGTCGTATT CGACGCACGG CGAGATCATG
GTGCCGTTCT ACATCTTCTA TTCGATGTTC GGCTTCCAGC GGATCGGCGA CCTCGCATGG
GCGGCGGGCG ACATGCGCTC GCGCGGCTTC CTGCTCGGCG GCACCGCGGG CCGCACGACG
CTGAACGGCG AAGGCCTGCA GCACGAAGAC GGTCACTCGC TCCTGTGGGC GGCATCGGTG
CCGAACTGCG TGAGCTACGA CCCGACGTTC GGCTACGAGC TCGCGGTGAT CATCCAGGAC
GGCCTGCGCC GCATGGTGCA GGAGCAGGAA GACGTGTACT ACTACGTCAC GGTGATGAAC
GAGAACTACG AGCACCCGGC GATTCCGCAG GGCGAGCACG TGGCGGCCGA CATCATCAAG
GGCATGTATG CGTTCAAGAA GGCCGACGCC GACCAGAAGG CGCCGCGCGT GCAGCTGCTC
GGCGCGGGCA CGATCTTCAA CGAAGTGATC GCCGCCGCCG ACCTGCTGAA GAACGACTGG
GGCGTCGCGG CCGATCTGTG GAGCGTGCCG AGCTTCACCG AACTCGCGCG TGAAGGCCAC
GATGTCGAGC GCTGGAACCT GCTCCATCCG ACCGAGGAGC GTCGCCTGTC GCACGTGCAG
AAGTGCCTGA AGGACACGCA GGGTCCGGTC ATCGCATCGA CCGACTACGT GCGCGCGCTG
GTCGACCAGA TCCGTGGTCA GATCGATCGC CGCTTCGTCG TGCTGGGCAC GGACGGCTTC
GGTCGTTCGG ACACCCGCGA AAAGCTGCGT CACTTCTTCG AAGTCGACCG TCACTGGGTC
ACCGTCGCCG CGCTCAACGC GCTGGCCGAC GAAGGCACGA TCGAGCGCAA GGTGGTCGCG
GACGCGATCG CCAAGTACAA CCTCGATCCG TCCAAGCCCA ACCCGATGAC CGTTTAA
|
|---|
| Protein sequence | MSAVPNEVMK YVAAERDDDP QETVEWLESL DGVISSVGTG RAHYLIEKQI EFARMHGEHL
PFSANTPYIN TIPVAAQAKI PGDQDIEHRI RSYTRWNALA MVLRAGKDTN VGGHIASFAS
AATLYDVGYN HFWHAASDQH GGDLVFVQGH SSPGVYSRAF LLGRLSEEQL DNFRQEVDGK
GISSYPHPWL MPDFWQFPTV SMGLGPIMAI YQARFMKYLE SRGIAKTAGR KVWAFLGDGE
TDEPESLGAI GMASREKLDN LVFVINCNLQ RLDGPVRGNG KIIQELESEF RGAGWNVIKV
IWGSRWDALF ARDQTGALMR RMMEVVDGEY QTYKSESGAF VREHFFNTPE LKALVADWSD
DDIWALNRGG HDPHKIYAAF HEATNTKGAP TVILAKTIKG YGMGESGQAM NITHQQKKLP
VEQLKKFRDQ FRLPIADEQI ADVPYLKFEE GSKELEYMRQ KRMDLGGYLP HRREKATSLP
VPALDAFEPL LKGTGEGREI STTMAFVRVL NILLKDKALG KRVVPIVPDE SRTFGMEGLF
RQIGIWNQEG QKYVPEDSDQ LMFYKESETG QILQEGINEA GGMCDWIAAA TSYSTHGEIM
VPFYIFYSMF GFQRIGDLAW AAGDMRSRGF LLGGTAGRTT LNGEGLQHED GHSLLWAASV
PNCVSYDPTF GYELAVIIQD GLRRMVQEQE DVYYYVTVMN ENYEHPAIPQ GEHVAADIIK
GMYAFKKADA DQKAPRVQLL GAGTIFNEVI AAADLLKNDW GVAADLWSVP SFTELAREGH
DVERWNLLHP TEERRLSHVQ KCLKDTQGPV IASTDYVRAL VDQIRGQIDR RFVVLGTDGF
GRSDTREKLR HFFEVDRHWV TVAALNALAD EGTIERKVVA DAIAKYNLDP SKPNPMTV
|
|---|
| |