Gene BamMC406_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2027 
Symbol 
ID6179004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2259737 
End bp2260483 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID641681793 
Productpeptide chain release factor 2 
Protein accessionYP_001808724 
Protein GI172061072 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCGA ACCCGGCCGA CCCGAACAAC TGCTTCATCG ACATCCAGGC CGGCGCCGGC 
GGCACCGAGG CGTGCGACTG GGCGTCGATG CTGCTGCGCC AATACCTGCG CTACTGCGAG
CGCAAGGGCT TCAAGGCCGA AGTGCTCGAA GAGTCGGACG GCGACGTCGC CGGCATCAAG
AACGCGACGG TCAAGGTCAC GGGCGAATAC GCATACGGCT TCCTGCGCAC CGAAACGGGC
ATCCACCGCC TCGTGCGCAA GTCGCCGTTC GACTCGTCCG GCGGCCGCCA CACGTCGTTC
TCGTCGGTGT TCGTGTATCC GGAAATCGAC GACTCGATCG AAGTCGAGGT CAATCCGGCC
GACCTGCGCA TCGACACGTA CCGCGCGTCG GGCGCGGGCG GCCAGCACAT CAACAAGACC
GACTCGGCCG TGCGGATCAC GCACATGCCG ACCGGCATCG TCGTGCAGTG CCAGAACGAC
CGCTCGCAGC ACCGCAACCG CGCCGAAGCA ATGGCGATGC TGAAGTCGCG CCTGTACGAA
GCCGAGATGC GCAAGCGCCA GGCCGAGCAG GACAAGCTCG AATCGAGCAA GACCGATGTG
GGCTGGGGCC ACCAGATCCG TTCGTACGTG CTCGACCAGA GCCGCGTGAA GGACCTGCGC
ACGAACGTCG AAATGAGCAA CACGCGAGCC GTGCTCGACG GCGATCTCGA CGACTTCATC
AGCGCGAGCC TCAAACAGGG CGTGTAA
 
Protein sequence
MFSNPADPNN CFIDIQAGAG GTEACDWASM LLRQYLRYCE RKGFKAEVLE ESDGDVAGIK 
NATVKVTGEY AYGFLRTETG IHRLVRKSPF DSSGGRHTSF SSVFVYPEID DSIEVEVNPA
DLRIDTYRAS GAGGQHINKT DSAVRITHMP TGIVVQCQND RSQHRNRAEA MAMLKSRLYE
AEMRKRQAEQ DKLESSKTDV GWGHQIRSYV LDQSRVKDLR TNVEMSNTRA VLDGDLDDFI
SASLKQGV