| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2011 |
|---|
| Symbol | |
|---|
| ID | 6178864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2241239 |
|---|
| End bp | 2242129 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641681777 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001808708 |
|---|
| Protein GI | 172061056 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000219515 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGT CGAGTTCTGT TTCCGATTTC GTCACGGTGC GCGGCGTCAA GCTGCATGTG
CGGCGCTGGG GCCGGCCCGA TGCGCCGACG CTGTTCATGC TGCACGGGTG GATGGACGTC
GCGGCGTCGT TCCAGTTCGT CGTCGACGCG CTCGCGGGCG ACTGGCAGGT GATCGCGCCG
GATGCGCGCG GCTTCGGCCT GTCCGACTGG CCGGTCGCAC GGCACGGCGG CGGTCATTAC
TGGTTCCACG AATATCTGGG CGATCTCGAC GCGCTCGTCG ATCACTATGC GCCGACCGGC
GAAGTCAATC TGATCGGGCA CAGCATGGGC GCGAACGTCG TGTGCCTGTA CGCGGGCGCG
CGGCCGGAGC GCGTGCGGCG CGTGGTCGAT CTCGAAGGGT TCGGGCTCGC CCCGGCGCGG
GCCGAGCAGG CGCCGCGCCG GCTGCGCGGC TGGCTCGACG AGCTGCGCGA GCCGCCGGTG
CTGCGCCCGT ACGCGTCGCT CGACGACGTG GCGGCCCGGC TGATCAAGAC CAATCCGCGG
CTCGAGCCGC GCCGCGCCGC GTTCCTTGCC GCACACTGGT CGAAGCGCGG CGACGACGGC
CTCTACCACC TGCTCGCGGA CCCCGCGCAC AAGATGGCGG GCCCGACGTT GTACCGGCTC
GACGAGGTGA TGGCCGTCTG GAAGCAGGTG CGCGCGAAGG TGCTGCACGT CGAGGCCGTC
GCTTCGCCGA CGCTCGCGTA CCTCGCGGGC GACATCCCGC TGCCGGAGTT CAAGGCGCGC
TTCGGCGCGT TCCCGGACTG GCGCGAAAAG CTCGTCGAGG ATGCGGGCCA CATGGTGCAC
CACGACCAGC CGGAGCAGAT CGCGGCGCTG ATCGAGGCCT TCTGCGCGTA G
|
|---|
| Protein sequence | MSASSSVSDF VTVRGVKLHV RRWGRPDAPT LFMLHGWMDV AASFQFVVDA LAGDWQVIAP
DARGFGLSDW PVARHGGGHY WFHEYLGDLD ALVDHYAPTG EVNLIGHSMG ANVVCLYAGA
RPERVRRVVD LEGFGLAPAR AEQAPRRLRG WLDELREPPV LRPYASLDDV AARLIKTNPR
LEPRRAAFLA AHWSKRGDDG LYHLLADPAH KMAGPTLYRL DEVMAVWKQV RAKVLHVEAV
ASPTLAYLAG DIPLPEFKAR FGAFPDWREK LVEDAGHMVH HDQPEQIAAL IEAFCA
|
|---|
| |