Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2005 |
Symbol | |
ID | 6178850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2236135 |
End bp | 2237040 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641681771 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001808702 |
Protein GI | 172061050 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.672271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000182643 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAACG GCACCCAAGA CGGCATTCAA ATCCGCGGCA GCATCCCCGC GATCGTCACT CCGATGCTCG AAGACGGCAG TCTCGATCTG CCGGCGTTTC GCAAACTGAT CGACTGGCAC ATCGCGGAAG GCACCGACGC AATCGTCGTG GTCGGCACGA GTGGCGAGTC GGCAACGCTC AACGTCGAAG AGCACATCCT GATGATCCGC ACGGCGGTCG AGCATGCGGC GAAGCGCATC CCGATCATCG CGGGCGCGGG CGGCAATTCG ACCGCGGAAG CGATCGAACT GACGAAGCAC GCGAAGGCCG TCGGCGCCGA CGCGACGCTG CAGGTCGTGC CGTACTACAA CAAGCCCACG CAGGAAGGGA TGTACCGGCA CTTCAAGTCG ATCGCCGAAG CGGTCGACCT GCCGGTGATC CTGTACAACG TGCCGGGCCG CACGGTCGCG GACATGGCGC ACGAGACGAC GCTGCGCCTC GCGCAGGTGC CGGGCATCAT CGGCGTGAAG GAAGCGACGG GCAACATCGA TCGCGCCGCG CACCTGATCA AGGCCGCTCC GAAGCATTTC GCGATCTACA GCGGCGACGA TCCGACCGCG ATCGCGCTGA TGCTGCTCGG CGGCCACGGC AACATCTCGG TGACGGCGAA CGTCGCACCG CGCGCGATGA GCGACCTGTG CCGCGCGGCG CTGGCCGGCG ACGTCGCCAC GGCGCGCGCG CTGCACATGA AGCTGCTGTC GCTGCACAAG AACCTGTTCA TCGAGGCGAA CCCGATTCCG GTGAAGTGGG CGCTGCAGGC GATGGGCAAG ATGCAGGGCG GCATCCGCCT GCCGCTTACG CCGCTCGACG AGCGCTGTCA CGATGTCGTG CGTTCGGCTC TCGTCGAGGC CGGCGTCCTC GCCTGA
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Protein sequence | MANGTQDGIQ IRGSIPAIVT PMLEDGSLDL PAFRKLIDWH IAEGTDAIVV VGTSGESATL NVEEHILMIR TAVEHAAKRI PIIAGAGGNS TAEAIELTKH AKAVGADATL QVVPYYNKPT QEGMYRHFKS IAEAVDLPVI LYNVPGRTVA DMAHETTLRL AQVPGIIGVK EATGNIDRAA HLIKAAPKHF AIYSGDDPTA IALMLLGGHG NISVTANVAP RAMSDLCRAA LAGDVATARA LHMKLLSLHK NLFIEANPIP VKWALQAMGK MQGGIRLPLT PLDERCHDVV RSALVEAGVL A
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