| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1982 |
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| Symbol | |
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| ID | 6178721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2211917 |
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| End bp | 2212780 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681748 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001808679 |
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| Protein GI | 172061027 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.963922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.532764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGG CAAGAAAAGC GCCGGTCAGG CGCGCGACCC AGGTCGCCGC GCGTCCGGCA
GCCAGGCGCG CGCCGGCGGC GAAGACGGAC GCGACGCGCG CCGTGCCGAA CGGCGCGCTC
AACGGTCATG CGAGGCCCGC GCGCGCGAAG AGCGCGGACG CGGCGCAGCC GGAGGCCGCG
ATGGCGGCCG CCGACGCGGT GCGCAAGGTG CGAGCATCCG AGGTGGCAGC CGACGGCGCC
GATGGCGTTG CGCGTCCTGC CTACTGGGAC AAGGCGTGCG CCGATCTCGT CAAGCGCGAC
CGCATCCTGA AGAAACTGAT CCCGAAGTTC GGTCCCGCGC ATCTCGTGAA GCGCGGCGAC
CCGTTCGTCA CGCTCGCGCG TTCGGTCGTC GGCCAGCAGA TCTCGGTGCC GTCCGCGCAG
GCGCTGTGGG CGTGCATTGA AGATGCGTGT CCGAAACTCG CGCCGCAGCC GGTCATCCGG
CTCGGCGCGG ACAAGCTGAT CGCATGCGGG CTGTCGAAGC GCAAGACGGA ATACATTCTC
GATCTCGCGC AACACTTCGT GTCCGGCGCG CTGCACGTCG ACAAATGGAC GTCGATGGAC
GACGAGGACG TGATCGCTGA ACTCACGCAG ATCCGCGGCA TCAGTCGCTG GACGGCCGAG
ATGTTCCTGA TCTTCAACCT GTCGCGGCCG GACGTGCTGC CGCTCGACGA TCCGGGCCTG
ATCCGCGCGA TCAGCGTCAA TTACTTCAGC GGGGAGCCCG TCACGCGCAG CGAGGCGCGC
GAGGTGGCCG CCAACTGGGA GCCGTGGCGT ACCGTCGCGA CCTGGTACAT GTGGCGCAGC
CTCGACGCGC CCGACGCCGA TTGA
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| Protein sequence | MATARKAPVR RATQVAARPA ARRAPAAKTD ATRAVPNGAL NGHARPARAK SADAAQPEAA
MAAADAVRKV RASEVAADGA DGVARPAYWD KACADLVKRD RILKKLIPKF GPAHLVKRGD
PFVTLARSVV GQQISVPSAQ ALWACIEDAC PKLAPQPVIR LGADKLIACG LSKRKTEYIL
DLAQHFVSGA LHVDKWTSMD DEDVIAELTQ IRGISRWTAE MFLIFNLSRP DVLPLDDPGL
IRAISVNYFS GEPVTRSEAR EVAANWEPWR TVATWYMWRS LDAPDAD
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