| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1964 |
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| Symbol | |
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| ID | 6178473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2188937 |
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| End bp | 2190820 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681729 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001808661 |
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| Protein GI | 172061009 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGG GTTCGTCCCG GACCGCCGCC GCGCGCATCC GTTCCGGCGC CGCGCAGGCG
GTCCGCGCCG CCGGCCGCAC GGCGGCGGTA TGGACAATAC AGGCGGTACT GGCCGCGACG
GCCGCGCATG CGGCATATGC GATCGCGCAG TACGGCGAGC CGAAATATCC GCCGGGCTTC
AAGCATTTCG ACTACGTGAA CCCGGACGCG CCGAAGGGCG GCACGCTCGT GCTCGCGAAT
CCGAGCCGGC TGACGTCGTT CGACAAGTTC AATCCGTTCA CGATGCGCGG CAACCCCGCG
CCGGGCATCG ACATGCTGTT CGAGAGCCTC ACGACCGGCA GCTCGGACGA ACCGGCGTCC
GCCTACGGGC TGCTCGCCGA CGACATCGAG ATCGCGCCGG ACCGCCGCTC GGTCACGTTC
CATCTGAACC CGCGCGCGCG CTTCTCGAAC GGCGACCCGG TCACGGCCGA CGACGTCAGG
TTTTCGTTCG ACACGCTCAA GAGCAAGCAG GCCGCGCCGC AGTTCGGCGC GTATTTCGCC
GAAATCGCGA AGGCCGTCGT GATCGACCGC GCGACCGTGC GGTTCGAATT CCGCAGCCCG
AACCGCGAGC TGCCGCTGAT CGCCGGCGGC GTGCCGGTGT TCTCGCGCAA GTGGGGGCTG
CGCGCGGACG GTTCGCGGAT TCCGTTCGAC CAGCTCGCGT TCGAGCAGCC GATCGGCAGC
GGCCCGTACC TGATCGAGCG CCACGACAAC GGCCGCACCA TTACATATAG GCGCAATCCC
GCGTACTGGG GCGCCGACCT GCCGGTGCGG GTCGGCACCC ACAACTTCGA GCGGATCGTC
TACAAGCTGT ACGGCGACGG CGTCGCGCGG CTCGAGGCGT TCAAGGCCGG CGAGTACGAC
GTGCTGGTCG AATACATCGC GCGCAACTGG GCGCGGCGCG ACGTCGGCAA GCGCTTCGAC
AGCGGCGAGC TCGTCAAGCG CGAATTCCGC CAGCACAACG GCGCGGGGAT GCAGGGTTTC
TTCATGAACC TGCGCCGGCC GCTGTTTCGC GACGTGCGCG TGCGCCAGGC GCTCGATCTC
GCGTTCGACT TCGAATGGCT GAACCGCCAG TTGTTCTATG GCGCGTACAC GCGCCTCGAC
AGCTATTTCG CCGACACCGA CCTGCAGGCG ACCGGCACGC CGGGCCCGGG CGAGCTGAAG
CTGCTGGAGC CGCTGCGCGC GCAGCTCGAT CCTGCGGTGT TCGGCCCGAT GGTCTCGCAA
CCGAGCACGA ACCCGCCGGG CTCGCTGCGC GCGAACCTGC TGAAGGCGCG CGCACTGCTC
GCGCAGGCCG GCTGGACCTA CCGCGACGGC GCGCTGCGCA ACGCGCAGGG CGAGCCGTTC
GAGTTCGAGA TCCTCGACGA TTCGGGCGCG GCGATGGAAG GCATCGTGAC GGCCTTTCGG
CGCAACCTCG CGAAGCTCGG CATCGAAGCG CGCTTTCGGA CGGCCGATTA CGCGCTGCTG
CAAAAGCGGC TCGACGCGTT CGACTACGAC ATGACGACGG TCCGCCTGCC GGGCGTGCAG
GTGCCGGGTG CCGAGCAGTT CTCGCGTTAC GGCAGCAAGT TCGCCGACGA GCCGGGATCG
GACAACCTCA TCGGCCTGAA GTCGCCGGCT GTCGACGCGC TGCTGCATGC ACTCGGCACC
GCGCAGACGC GCGACGAGCT GCTCGACGCG ACCCACGCGC TCGACCGCGT GCTGATGCAC
GGCTATTACG CGGTTCCCCA GTGGTACAGC ACGACGCACC GGATCGCGTA CAAGCGCACG
CTCGGCTATC CGCAGACGCT GCCGCTGTAC TATTCGGCCG AGGGCTGGGT CGTGTCGACC
TGGTGGGCCA AGCCCGGCCA CTGA
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| Protein sequence | MTKGSSRTAA ARIRSGAAQA VRAAGRTAAV WTIQAVLAAT AAHAAYAIAQ YGEPKYPPGF
KHFDYVNPDA PKGGTLVLAN PSRLTSFDKF NPFTMRGNPA PGIDMLFESL TTGSSDEPAS
AYGLLADDIE IAPDRRSVTF HLNPRARFSN GDPVTADDVR FSFDTLKSKQ AAPQFGAYFA
EIAKAVVIDR ATVRFEFRSP NRELPLIAGG VPVFSRKWGL RADGSRIPFD QLAFEQPIGS
GPYLIERHDN GRTITYRRNP AYWGADLPVR VGTHNFERIV YKLYGDGVAR LEAFKAGEYD
VLVEYIARNW ARRDVGKRFD SGELVKREFR QHNGAGMQGF FMNLRRPLFR DVRVRQALDL
AFDFEWLNRQ LFYGAYTRLD SYFADTDLQA TGTPGPGELK LLEPLRAQLD PAVFGPMVSQ
PSTNPPGSLR ANLLKARALL AQAGWTYRDG ALRNAQGEPF EFEILDDSGA AMEGIVTAFR
RNLAKLGIEA RFRTADYALL QKRLDAFDYD MTTVRLPGVQ VPGAEQFSRY GSKFADEPGS
DNLIGLKSPA VDALLHALGT AQTRDELLDA THALDRVLMH GYYAVPQWYS TTHRIAYKRT
LGYPQTLPLY YSAEGWVVST WWAKPGH
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