| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1962 |
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| Symbol | |
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| ID | 6178378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2186695 |
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| End bp | 2187792 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681727 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001808659 |
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| Protein GI | 172061007 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.576949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGG CCGTCGTGTC GTCCCGCGTC GACGCCGCGC GTGCGCGCGT GTCGCCGTCG
CCCGCGCGCC GCGTCTGGCA ACGCTTTCGC CAGCAGCGCC TCGGCTACTG GAGCTTCGTG
ATCTTCTTCG TCGCGTTCGC CGCGAGCCTC GCGGCGCCGC TGTGGTCGAA CGACAAGCCG
CTCGTCGTGC GCTACGACGA TCACTACTAT TTCCCGATGT TCCATGCGTA CCCGGAGACG
ACCTTCGGCG GCGACTTCCC GGCGCAGGCC GACTATCTCG ATCCGTACGT GCGCAAGCGG
CTCGAGGCGC CGGGCAACTT CGTCGTCTAT CCGCCGAACC GCTATTACTA CGACACGCTG
AACTACTTCT CGAGCGTGCC GAATCCGGCG CCGCCGTCGC GCGAGAACTG GCTCGGCACC
GATGCGCAGG GGCGCGACCT GCTCGCGCGG CTCGTGTACG GGTTCCGCGT GTCGGTCGAG
TTCGGGCTGA TCCTGACCGT GATCGGCACG CTGCTCGGGA TCGCCGCGGG CGCGGTGCAG
GGTTTCTTCG GCGGGCGCAT CGACATCGTC GGACAACGGC TGATCGAGAT CTGGAGTTCG
CTGCCGGAGC TGTACCTGCT GATCATCTTC GCGTCGATCT TCGAGCCGAG CTTCCTGCTG
CTGATCGTGC TGCTGTCGCT GTTCGGCTGG ATCGGCCTGG CCGACTACGT GCGCGCCGAA
TTCCTGCGTA ACCGTACGCA GGACTACGTG CGCGCGGCCC GCGCGATGGG GCTCACGAAC
TGGCAGATCA TCTGGCGCCA CGTGCTGCCG AACAGCCTGA CGCCCGTGAT CACGTTCCTG
CCGTTCCGGA TGAGCGGCGC GATCCTCGCG CTCACGAGCC TCGACTTCCT CGGGCTCGGC
GTGCCGCCGC CGACGCCAAG CCTCGGCGAA CTGCTCGCGC AGGGCAAGGG CAACCTCGAC
GCGTGGTGGA TCTCGCTGTC GACGTTCGGC GTGCTGGTCG CGACGCTGCT GCTGCTGACC
TTCATGGGTG ACGCGCTGCG CAACGCGCTC GACACGCGGA TCGCCGACTC GGTGCGCGCG
GCGGGAGGCC AGCGATGA
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| Protein sequence | MNRAVVSSRV DAARARVSPS PARRVWQRFR QQRLGYWSFV IFFVAFAASL AAPLWSNDKP
LVVRYDDHYY FPMFHAYPET TFGGDFPAQA DYLDPYVRKR LEAPGNFVVY PPNRYYYDTL
NYFSSVPNPA PPSRENWLGT DAQGRDLLAR LVYGFRVSVE FGLILTVIGT LLGIAAGAVQ
GFFGGRIDIV GQRLIEIWSS LPELYLLIIF ASIFEPSFLL LIVLLSLFGW IGLADYVRAE
FLRNRTQDYV RAARAMGLTN WQIIWRHVLP NSLTPVITFL PFRMSGAILA LTSLDFLGLG
VPPPTPSLGE LLAQGKGNLD AWWISLSTFG VLVATLLLLT FMGDALRNAL DTRIADSVRA
AGGQR
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