| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1952 |
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| Symbol | |
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| ID | 6178289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2174410 |
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| End bp | 2175315 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681711 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001808650 |
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| Protein GI | 172060998 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.514142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGT TCAAACAGAT CGAAACGTTC GCCGCGGTCG CGGCGAAGGG CAGCCTGTCG
GCGGCCGCGC ACGCGGAAGG CGTCGCGCCG GCGATCATCG GCCGCCGCCT CGACGCGCTC
GAGGAGCGGC TCGGCGTCAA GCTGCTGGTG CGTACGACCC GCAAGCTCAC GCTGACCTTC
GAGGGTTCGG CTTTCCTCGA GGATTGCCAG CGCATCATCA ACGACATGCA GAACGCGGAG
GCGAGCGTGT CCGCCGGCGG CGTGAAGGCG AGCGGCCACC TGCGCATTTC CGCGCCGGCC
GGCTTCGGGC GGCGCCACGT TGCGCCCCTC GTGCCCGAAT TCAGCGGCGC GCATCCGGAC
GTGTCGGTCA CGCTCGACCT GTCCGACCGG ATGGTCGACC TCGTCAACGA AGGGTTCGAT
TGCGCGGTGC GGCTCGGCGA GCTGCCCGAT TCGTCGCTGG TGTCGCTGAA GCTCGGCGAG
AACCGGCGCG TGTGCGTCGC GTCTCCGGCG TATCTCGCAC GGCGCGGCAC GCCGGCCACG
CTCGCCGAAC TCGCGCGCCA CAACTGCCTC GCGCTGGCCG CGAACGCGAA CCAGCAGCGC
GGCTGGGCGT TCCAGGAGGG CGACAAGGTC GTGTCGATCC GCGTGAACGG CACGATGGAA
TGCTCGGACG GCGCGGTGCT GCACGAGTGG TGCCTCGCCG GCTACGGCCT GGCATGGCGA
TCGTGGTGGG AGGTCGGCGG CGACATCGCG GCCGGCCGCC TCGTCAGCGT GCTCGATGCG
TTCGCGGCGC CGCCGATCGG CATCCACGCG GTGTTTCCGC AGCGCCGCCA CCTGCCGCTG
CGCGTGCGGC TGTTTCTCGA TTACCTGAAA CATACGTACG AGCGGCCCGG ATATTGGGGC
GAGTAG
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| Protein sequence | MDRFKQIETF AAVAAKGSLS AAAHAEGVAP AIIGRRLDAL EERLGVKLLV RTTRKLTLTF
EGSAFLEDCQ RIINDMQNAE ASVSAGGVKA SGHLRISAPA GFGRRHVAPL VPEFSGAHPD
VSVTLDLSDR MVDLVNEGFD CAVRLGELPD SSLVSLKLGE NRRVCVASPA YLARRGTPAT
LAELARHNCL ALAANANQQR GWAFQEGDKV VSIRVNGTME CSDGAVLHEW CLAGYGLAWR
SWWEVGGDIA AGRLVSVLDA FAAPPIGIHA VFPQRRHLPL RVRLFLDYLK HTYERPGYWG
E
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