| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1948 |
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| Symbol | |
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| ID | 6178309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2170359 |
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| End bp | 2171897 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681707 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001808646 |
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| Protein GI | 172060994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.579383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGA GCATTAACTC CAGCCCGCTC AACGCGATCG CCGACCAGGC GCTCGGTCTC
GACGACGCCG CCGTACCGGC AGCGATCGAA CCGGCGTCGG ACGAGCCCAG CTTCGCGTCG
CTCGGGCTGT CGCCGGAGAT CGTCTCCGCG CTGGAGGCCG CCGGCTATGT GAAGCCGACG
CCGGTCCAAC AGCGCGCGAT TCCGGCCGGC ATCGCCGGCC GCGACCTGCT GGTGTCGAGC
CCGACCGGTT CGGGCAAGAC GGCCGCCTTC ATGCTGCCCG CGATCGAACG TTTCGCGCAG
CTTCAGAAGA CGCTGGCGCA GCAACCGCGC ACGCCGCGCG AACCGAGCCA GGGCGACCGC
CGCGTGCGCC GCCCGCAACC CGTCGCGCGC CCGGGCCTGC TCGTGCTGAC GCCGACCCGC
GAACTCGCGA TGCAGGTCAC GACGGCCGCA TCGACCTACG GCAAGCACCT GAAGCGCCTG
CGCACCGTCA GCATCCTCGG CGGCGTCGCC TATGGCCAGC AGCTGATGCT GCTCGCGAAG
AACCCGGAAA TCCTGGTCGC CACGCCGGGC CGCCTGCTGG ATCACCTCGA GCGCGGCCGT
ATCGACCTGT CGGAACTGAA GATGCTCGTG CTCGACGAAG CCGACCGCAT GCTCGACATG
GGCTTCATCG ACGACATCGA GACGATCGTC GCGGCAACGC CGGCGTCGCG CCAGACGATG
CTGTTCTCGG CCACGCTCGA CGGCAAGATC GGTTCGCTGA CGGGCCGCCT GCTGAAGGAC
CCGGAGCGCA TCGAGATCCA GCAGCGCCTC GAGTCGCGCA CGAACATCGC GCAGACCGTG
CACTACGTCG ACGACCGCGA CCACAAGGAT CGCCTGCTCG ATCACTTGCT GCGCGACGAC
GCGCTCGACC AGGCGATCAT CTTCACGGCG ACCAAGATCG ACGCCGACCA GCTCGCCGGC
CGTCTCGCCG ACGCAGGCTT CGAATCGGCC GCACTGCACG GCGACCTGCC GCAGGGCGCG
CGTAACCGCA CGATCCGTGC GCTGCGCGAG CGTCGTGTGC GCGTGCTGGT CGCGACCGAC
GTCGCGGCCC GCGGCATCGA CATCCCGGGC ATCACGCACG TGTTCAACTA CGACCTGCCG
AAGTTCGCGG AAGACTACGT GCACCGTATC GGCCGTACGG GCCGCGCCGG CCGTTCGGGC
ACCGCGGTGA GTCTCGTGCA CCACGCCGAA CAGGGCGCGC TCAAGCGCAT CGAGCGCTTC
GTGCGCTCGC CGCTGCCGGT CAACGTGATC GAAGGCTTCG AGCCGCGCAA GGCACCCCCG
CGCAACGGGA GCACCGGCGG CCGCGGCCGT CCGGGCGGCG GTAACGGCGG TCGTCGTTTC
GGCGGCAAGC CGGGCGGCGG TCATGGCGGC GCCGGCCGCA GCTACGGCGG CGGCAATGGC
GGCGGCTGGA GCGGCAAGCC GGGCGGCAGC CGTGACGGCG GCCCGCGTCG CGACGGCCAA
CGCAGCAGCG GCCCGCGTCG CAGCAACTCG GCGTCGTAA
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| Protein sequence | MTSSINSSPL NAIADQALGL DDAAVPAAIE PASDEPSFAS LGLSPEIVSA LEAAGYVKPT
PVQQRAIPAG IAGRDLLVSS PTGSGKTAAF MLPAIERFAQ LQKTLAQQPR TPREPSQGDR
RVRRPQPVAR PGLLVLTPTR ELAMQVTTAA STYGKHLKRL RTVSILGGVA YGQQLMLLAK
NPEILVATPG RLLDHLERGR IDLSELKMLV LDEADRMLDM GFIDDIETIV AATPASRQTM
LFSATLDGKI GSLTGRLLKD PERIEIQQRL ESRTNIAQTV HYVDDRDHKD RLLDHLLRDD
ALDQAIIFTA TKIDADQLAG RLADAGFESA ALHGDLPQGA RNRTIRALRE RRVRVLVATD
VAARGIDIPG ITHVFNYDLP KFAEDYVHRI GRTGRAGRSG TAVSLVHHAE QGALKRIERF
VRSPLPVNVI EGFEPRKAPP RNGSTGGRGR PGGGNGGRRF GGKPGGGHGG AGRSYGGGNG
GGWSGKPGGS RDGGPRRDGQ RSSGPRRSNS AS
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