| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1920 |
|---|
| Symbol | tsf |
|---|
| ID | 6179022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2135379 |
|---|
| End bp | 2136260 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641681679 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_001808618 |
|---|
| Protein GI | 172060966 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.305981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAA TTACCGCAAG CATGGTGGCA GAACTGCGCG CAAAGACCGA CGCACCGATG
ATGGAGTGCA AGAAGGCGCT GACGGAAGCC GACGGCGACC TGGCCAAGGC TGAAGAGCTG
CTGCGCGTCA AGCTCGGCAA CAAGGCGAGC AAGGCGGCAT CGCGCGTGAC GGCCGAAGGC
GTCGTCGCAT CGTTCGTCGG CGGCAATGCA GGCGCGCTGG TCGAACTGAA CTGCGAAACC
GACTTCGTCG CGAAGAACGA CGACTTCCTC GCATTCTCGA AGACGGTTGC AGAACTCGTC
GCGACGCAGA ACCCGGCCGA CGTGGCCGCG CTGTCGGCGC TGCCGCTGGA AGGCTCGACG
GTCGACGCAG TGCGCCTGGC ACTGATCGGC AAGATCGGCG AGAACGTCTC GATCCGCCGG
TTCGTGCGCT TCGAAACCGC GAACAAGATC GCGACGTACC TGCACGGCGC GCGCATCGGC
GTGATCGTCG AGTACACGGG TGCGGACGAG CAGGTCGGCA AGGACGTCGC GATGCACATC
GCCGCGATGA AGCCGGTCGC GCTGTCGTCG GCCGACGTGC CGGCGGAACT GATCGACACG
GAACGCCGCG TGGCCGAGCA GAAGGCTGCG GAATCGGGCA AGCCGGCCGA AATCGTCGCG
AAGATGGTCG ACGGCAGCGT CCAGAAGTAC CTGAAGGAAG TGTCGCTGCT GAACCAGACG
TTCGTGAAGA ACGACAAGCA GACGATCGAG CAGATGCTGA AGGCCGCGAA TTCCACGGTG
CAGAAGTTCG CGCTGTTCGT CGTCGGCGAA GGCATCGAGA AGCGCCAGGA CGACTTCGCC
GCCGAAGTGG CCGCGCAAGT CGCAGCAGCA AAGCAGCAGT AA
|
|---|
| Protein sequence | MAAITASMVA ELRAKTDAPM MECKKALTEA DGDLAKAEEL LRVKLGNKAS KAASRVTAEG
VVASFVGGNA GALVELNCET DFVAKNDDFL AFSKTVAELV ATQNPADVAA LSALPLEGST
VDAVRLALIG KIGENVSIRR FVRFETANKI ATYLHGARIG VIVEYTGADE QVGKDVAMHI
AAMKPVALSS ADVPAELIDT ERRVAEQKAA ESGKPAEIVA KMVDGSVQKY LKEVSLLNQT
FVKNDKQTIE QMLKAANSTV QKFALFVVGE GIEKRQDDFA AEVAAQVAAA KQQ
|
|---|
| |