Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1912 |
Symbol | |
ID | 6178776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2126655 |
End bp | 2127182 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681671 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_001808610 |
Protein GI | 172060958 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.753095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.41157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTAACCG GTAAGTTTTC GAAACGAGTG ATGTGTGCGC TGACCGTTGC GCTGGCCTTG GGCGCGGCGA CGGCGCATGC TCAGGACGTC GCCCGCATCG CGGCGGTCAA TTCGGATCGG ATCCTGCGCG AGTCGGCGCC CGCCAAGGTG GCGCAGACGA AACTCGAAGC CGAGTTCGCG AAGCGCGACA AGGAACTGCA GGACCTCGCG GCGCGCCTGA AGTCGATGTC CGACTCGCTG GACAAGAACG GTGCGTCGCT GTCGGCGGCC GATCGTGCGC AGAAGCAGCG CGATCTCGCG CAGCTCGACA CCGACTTCCA GCGCAAGCAG CGCGAGTTTC GCGAGGACCT GAACCAGCGC CGCAATGAGG AACTCGCGGC GGTGCTGGAG CGCGCGAACA AGGTCATCAA GCAGATAGCC GAGCAGCAGA ATTACGACCT GATCGTGCAG GAAGCCGTGT ACGTCAGTCC GCGCATCGAC ATCACCGACA AGGTGCTCAA GGCGCTCGCG TCCGGCTCGA CGAACTGA
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Protein sequence | MLTGKFSKRV MCALTVALAL GAATAHAQDV ARIAAVNSDR ILRESAPAKV AQTKLEAEFA KRDKELQDLA ARLKSMSDSL DKNGASLSAA DRAQKQRDLA QLDTDFQRKQ REFREDLNQR RNEELAAVLE RANKVIKQIA EQQNYDLIVQ EAVYVSPRID ITDKVLKALA SGSTN
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