| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1906 |
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| Symbol | |
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| ID | 6176953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2121172 |
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| End bp | 2121954 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681665 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001808604 |
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| Protein GI | 172060952 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.602195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCA TTACATCTCG CGACAACCCG CTGTACAAGC GCCTGAAGGC GCTCGCGGGC
TCGACGTCTC ACCAGCGGCG CGGCGGCCAG GCGCTGCTCG AAGGTTTCCA TCTCGCCGCC
GCGTATCTCG ATACGGGCGC GACACCGGAG CTGTGCGTCG CGACCGAAGG CGCGCTCGCG
CACGCCGAAG CGCAGGCGAT CATCGCGCGC ATCGACGCGC AGCGGGTCGT CACGCTGCCC
GACGCGCTGT TCGGCCAGTT GTCGAACGTG GTCAGCGGCG TCGGTTTCCT GCTGCTCGTC
GACCGGCCCG TGCAGCCGCT GCCCGAGCGC GTCACGCACA CGTCGGTCGT GCTCGACGGC
GTGCAGGACG CCGGCAACGT CGGCTCGATC CTGCGCAGCG CGGCGGCGGC CGGCGTGCGG
CACGTGTTCT GCGCGCCGGG CACCGCCTAT GCGTGGTCGT CGAAGGTGCT GCGTTCGGGA
ATGGGCGCGC ACTTCCTGCT GTCGATCCAC GAGGATGTCG AGCCGGATGC GCTCGCCGCG
CGGCTCGACG TGCCGGTCGC GCTGACGGAT TCGCACGGCG CGCAAGCGGT CTTCGACTGC
GACCTGGCCG GGCCCGTCGC CTGGGTGTTC GGCAACGAGG GCGCCGGCGT GTCGGCGTTC
TGGCGCGACG CGGCCACGCA TCGCGTGACG ATCCCGCAGC CCGGCGGAAT GGAGTCGCTG
AATGTCGCGG CCGCGGCGGC GGTGTGCCTG TTCGAGCAGG TGCGGCAGCA GCGGCGCACA
TGA
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| Protein sequence | MKSITSRDNP LYKRLKALAG STSHQRRGGQ ALLEGFHLAA AYLDTGATPE LCVATEGALA
HAEAQAIIAR IDAQRVVTLP DALFGQLSNV VSGVGFLLLV DRPVQPLPER VTHTSVVLDG
VQDAGNVGSI LRSAAAAGVR HVFCAPGTAY AWSSKVLRSG MGAHFLLSIH EDVEPDALAA
RLDVPVALTD SHGAQAVFDC DLAGPVAWVF GNEGAGVSAF WRDAATHRVT IPQPGGMESL
NVAAAAAVCL FEQVRQQRRT
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