Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1869 |
Symbol | |
ID | 6176676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2085328 |
End bp | 2086257 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681628 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001808567 |
Protein GI | 172060915 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0145349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGC AACGCGAGGC GATCGACACG TACCTCTTGC GCGTCTTGCA CACTTTGTTG ATGGAGCGCA GCGTCACGCG CGCGGCCGTC AAACTGAACC AGTCGCAACC GGCGATCAGC GCCGCGCTGC GGCGCCTGCG CGACATCACC GGCGACCCGC TCCTCGTGCG CGGCAAGTCC GGCATGGTCC CGACCGAATA CGGGCTGCGC CTGCTCGAGC CGGTACAGAA CGCACTGCGT GAAATCGAGC GCATCAAGTT CCAGCAGCAC AATTTCGACC CGGCCACGTC GATTCGCTGC TATCGGATCG GCTGCCCCGA CTACCTGAAC GTGCTGTTCG TGCCGACCGT CGTCGAACGC TTCCGCCAGG CCGCGCCGAA TGCGACGCTC GAGTTCCACT CGCTCGGCCC CGCGTTCGAC TACGAGCTCG CGCTGGAAGA CGGCAAGCTC GACATCGTCG TCGGCAACTG GCCCGAGCCG CCCGAACAGC TGCACCTGTC GAACCTGTTC GTCGACGAAA TCGTCTGCCT GATGAGCAAC ACGCATCCGT TCGCGAAGCG CGGCGGGCTC ACGCTCGACC AGTACCTGAA CGCGCCGCAT CTCGCGCCGA CGCCGTACTC GGTCGGCCAG CGCGGCGCGA TCGACGTGCA CCTCGCGCGC GAGCGGCTCA AGCGCCATGT GGTCGTCACG CTGCCGTACT TCAACCTCGC ACCGTACGTG CTGGTGAAGT CCGACCTGAT CTTCACGACG ACGCGCCTGT TCGCCGATCA TTACGCGAAG TTCCTGCCGC TGTCGGTCGT GCCGGCGCCG CTCGACTTCC CACCGATGCA GTACTACCAG CTGTGGCACG AACGCTGCCA CTATTCCGAC GAAGTGCGCT GGCTGCGCAG CCTCGTCGCC GAAGCGACCC GCACGCTGAT CGAGGCTTGA
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Protein sequence | MSQQREAIDT YLLRVLHTLL MERSVTRAAV KLNQSQPAIS AALRRLRDIT GDPLLVRGKS GMVPTEYGLR LLEPVQNALR EIERIKFQQH NFDPATSIRC YRIGCPDYLN VLFVPTVVER FRQAAPNATL EFHSLGPAFD YELALEDGKL DIVVGNWPEP PEQLHLSNLF VDEIVCLMSN THPFAKRGGL TLDQYLNAPH LAPTPYSVGQ RGAIDVHLAR ERLKRHVVVT LPYFNLAPYV LVKSDLIFTT TRLFADHYAK FLPLSVVPAP LDFPPMQYYQ LWHERCHYSD EVRWLRSLVA EATRTLIEA
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