| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1862 |
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| Symbol | |
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| ID | 6177996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2077416 |
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| End bp | 2079935 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681621 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001808560 |
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| Protein GI | 172060908 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000145704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000925337 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAATTA TCAAACGACC GCCTTCTTCT TCCGACCGGA ACGAACCTCA CTACACATTG
CGCCGTTCGC CGTCGGGAGC CTACTACCCC GATGACGACA ACGGCGACGA CGATCGCCGC
ACGCAGCGCC GTGGAGGAGG AGGCGGCGGC GGCCGCTCGT TCGGCTCGCG CGTCGCGCTG
TGGTTCGTCG GACTGTTCGC GACGCTCGCG GTCGTCGGCG CGCTGATCGT CGGCTACGCA
CTCGTCGTGA TGGCACCGCA ACTGCCGTCG CTCGATGCGT TGACCAACTA CCAGCCGAAG
GTGCCGTTGC GCGTATTCAC CGCCGATCAC GTGCTGATCG GCGAGTTCGG CGAGGAGCGC
CGCAGCCTCG TGCGCTTCCA GGACATTCCC GACGTGATGA AGAAGGCCGT GCTCGCGATC
GAGGACTACC GCTTCTACGA ACACGGCGGC GTCGACTTCC TCGGCATCCT GCGCGCGGGC
GTGGCCGACC TGATGCACGG CGGCGCGCGC CAGGGCGCGA GCACGATCAC GATGCAGGTC
GCGCGCAACT TCTTCCTGTC GAGTGAAAAG ACCTACACGC GCAAGATCTA CGAGATGCTG
CTCGCGTACA AGATCGAGAA GGCGCTGACG AAGGACCAGA TCCTCGAGCT GTACATGAAC
CAGATCTACC TGGGCCAGCG CTCGTACGGC TTCGCGGCCG CCGCGCGCGT GTATTTCGGC
AAGGACCTGA AGGACATCAC GCTCGCCGAA GCGGCGATGC TCGCGGGGCT GCCGAAGGCG
CCGTCCGCGT ACAACCCGGT CGTCAATCCG AAGCGCGCGA AGGTGCGTCA GGAATACATC
CTGAAGCGCA TGCTCGAGAT CGGCTACATC ACGCAGCCGC AGTACGACCA GGCGGTGAAG
GAGGAGATCC GCGTGCGCAC GCCGGGCAAC CAGTATGCGG TGCATGGCGA ATACGTGTCC
GAGATGGTGC GGCAGATGAT GTACCAGCAG TACAAGGACG AAACCTATAC GCGCGGACTG
ACCGTCACGA CGACGATCAA CTCGGCCGAC CAGGAAGCGG CGTACCAGGC CGTGCGCCGC
GGCATTCTCG ATTACGAGCG CCGCCACGGC TATCGCGGGC CGGAAGGCTC GATCAACCTG
CCGGCGGCCG GCGACGAGCG CGACGAGGCG ATCGACGACG CGCTCGCCGA TCATCCGGAC
AACGGAGATC TGCAATCGGC GGTGGTGCTG GCGGCGTCGC CGAATGCGGT CGAGGTGCAG
TTCGTCGGCG GCGCGACGAC GACGATCGGC CCGGCCGGGC TGCGCTTCGT GTCGGGCGCG
CTGAATCAGC GCGCGAATGC CACGCTGCGG ATCAAGCCGG GTTCGATCGT GCGCGTGCTG
AAAGATGGCA AGACGGGCTG GCAGGTCGTG CAGCTGCCGC AGGTCGAAGG CGCGCTCGTC
GCGATCGCGC CGCAGGACGG GGCGATCCGC TCGCTCGTCG GCGGCTTCGA CTTCAACAAG
AGCAAGTTCA ACCACGTGAC GCAGGCGTGG CGCCAGCCGG GTTCGTCGTT CAAGCCGTTC
ATTTATTCGG CTTCGCTCGA CAAGGGCCTC GGACCGGCGA CGATCATCAA CGATGCACCG
CTGTACTTCC CGCCGAGCGT GCCGGGCGGC ACCGCGTGGG AGCCGAAGGA CGACGACCAG
CCGGACGGCC CGATGTCGAT GCGTACCGGC CTGCAGCGTT CGAAGAACCT CGTGTCGATC
CGGATCCTCG CGTCGATCGG CACGCAGTAC GCGCAGCAGT ACGTGACGCA GCGCTTCGGC
TTCGATCCTG CGAAGACGCC GCCGTATCTG CCGATGGCGC TCGGTGCGGG TCTCGTGACG
CCGCTGCAGC TCGCGACCGG CTATGCGGTG TTCGCGAACG GCGGCTACAA GGTCGATCCG
TACCTGATCG CCGAAGTCGA CGACGCGCAC GGGCAGGCGC TGCAGCGGTC GCAGCCGGTC
GTGGCCGGCG GCACGGCGCC GCGCACGATC GAAGGTCGCA ACGCGTACGT GATGAACAGC
CTGCTGCATA CGGTCGCGAC GGCCGGCACG GGCGCCGGCA CCAACGCGCT TGGTCGCGGC
GACCTGCAGG GCAAGACGGG TACGACGAAC GATGCGAAGG ACGGCTGGTT CGCCGGCTAC
CAGCAGTCGC TCGTCGCGGT CGCGTGGATG GGCTTCGACC AGCCGAAGAG CCTCGGCAGC
CGCGAATTCG GCGCGCAGCT CGCGCTGCCG ATCTGGGTGA ACTACATGCG CACCGCGCTG
AACGGCGTGC CCGAGCAGCA GATGCCGATG CCGGACGGCC TGACGACGGT CGACGGCGAG
CTGTACTACG CCGATCGCAC GCCGGGCAAC GGCTTCGTCG GGAGCGTGGA CATCAATCCG
GCCGAGAACG CGATCAGCGC GAACGACGCA CTTGGCTCGG CCGGCGCGGC CGGGCTTGCG
CCGCCGCCCG TCACGCAGCA GGAGAAGCAG CAGATCATGG ACATGTTCGA GAACAAGTAA
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| Protein sequence | MPIIKRPPSS SDRNEPHYTL RRSPSGAYYP DDDNGDDDRR TQRRGGGGGG GRSFGSRVAL
WFVGLFATLA VVGALIVGYA LVVMAPQLPS LDALTNYQPK VPLRVFTADH VLIGEFGEER
RSLVRFQDIP DVMKKAVLAI EDYRFYEHGG VDFLGILRAG VADLMHGGAR QGASTITMQV
ARNFFLSSEK TYTRKIYEML LAYKIEKALT KDQILELYMN QIYLGQRSYG FAAAARVYFG
KDLKDITLAE AAMLAGLPKA PSAYNPVVNP KRAKVRQEYI LKRMLEIGYI TQPQYDQAVK
EEIRVRTPGN QYAVHGEYVS EMVRQMMYQQ YKDETYTRGL TVTTTINSAD QEAAYQAVRR
GILDYERRHG YRGPEGSINL PAAGDERDEA IDDALADHPD NGDLQSAVVL AASPNAVEVQ
FVGGATTTIG PAGLRFVSGA LNQRANATLR IKPGSIVRVL KDGKTGWQVV QLPQVEGALV
AIAPQDGAIR SLVGGFDFNK SKFNHVTQAW RQPGSSFKPF IYSASLDKGL GPATIINDAP
LYFPPSVPGG TAWEPKDDDQ PDGPMSMRTG LQRSKNLVSI RILASIGTQY AQQYVTQRFG
FDPAKTPPYL PMALGAGLVT PLQLATGYAV FANGGYKVDP YLIAEVDDAH GQALQRSQPV
VAGGTAPRTI EGRNAYVMNS LLHTVATAGT GAGTNALGRG DLQGKTGTTN DAKDGWFAGY
QQSLVAVAWM GFDQPKSLGS REFGAQLALP IWVNYMRTAL NGVPEQQMPM PDGLTTVDGE
LYYADRTPGN GFVGSVDINP AENAISANDA LGSAGAAGLA PPPVTQQEKQ QIMDMFENK
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