| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1840 |
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| Symbol | clpX |
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| ID | 6176542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2053311 |
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| End bp | 2054582 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641681599 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001808539 |
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| Protein GI | 172060887 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.287756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0393139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AAAAAGGTTC GAACAGCGAG AAGCTGTTGT ATTGCTCGTT CTGCGGAAAG
AGCCAGCATG AGGTGAAGAA GCTCATTGCC GGCCCGTCGG TATTCATCTG CGATGAATGC
ATCGACCTCT GCAACGAGAT CATTCGCGAC GAGGCGGCTG CCGCCGGCGT CGAGGCCAGC
CTGTCCCGGT CGGATCTGCC GAGCCCGCAG GAAATTCGCG ACATCCTCGA TCAGTACGTG
ATCGGGCAGG AGCGCGCGAA GAAGATCCTC GCGGTGGCCG TGTACAACCA CTACAAGCGC
CTGAAGCATC TCGACAAGAA GGACGACGTC GAGCTGTCGA AGAGCAACAT CCTGCTGATC
GGCCCGACGG GCTCCGGCAA GACGCTGCTC GCGCAGACGC TCGCGCGGTT GCTGAACGTG
CCGTTCGTGA TCGCCGATGC AACGACGCTG ACCGAAGCCG GCTATGTCGG CGAGGACGTC
GAGAACATCA TCCAGAAGCT GTTGCAGAAC TGCAACTACG AGGTCGACAA GGCCCAGCGC
GGGATCGTCT ACATCGACGA AATCGACAAG ATCAGCCGCA AGTCGGACAA CCCGTCGATC
ACGCGCGACG TGTCGGGCGA GGGCGTCCAG CAGGCACTGC TGAAGCTCGT CGAAGGCACG
ATGGCGTCGG TGCCGCCGCA GGGTGGCCGC AAGCATCCGA ACCAGGATTT CATTCAGGTC
GACACGACCA ACATCCTGTT CATTTGCGGC GGCGCGTTCG ACGGCCTCGA GAAGGTAATC
ACCGATCGCA CCGAAAAGAC GGGCATCGGC TTTGGCGCGA CGGTCAAGAG CAAGCAGGAA
CGCGACGCGG GCGAAGTGCT GCGCGAGACG GAACCGGAAG ACCTGATCAA ATTCGGTCTG
ATCCCCGAAT TGATCGGCCG GCTGCCGGTG GTCGCGACGC TCGGCAAGCT CGATGAAGCC
GCGCTGATGA AGATCCTCGT CGAGCCGAAG AATGCGCTCG TCAAGCAGTA TCACAAGCTG
TTCGCGATGG AGCGCGTCGA GCTGGAAATC CGGCCGGGCG CGTTGCAGGC AGTCGCCCGC
AAGGCGATCC GCCGCAAGAC CGGCGCGCGC GGCTTGCGTT CGATCATCGA ACAGGCATTG
CTCGACGTGA TGTACGAGTT GCCGGCGATG AAAGGGGTCA GCAAGGTCAT CATCGATGAA
AACGTGATCG ATGGCGACGG CAAACCCCTG CTGATCTATG AGGACACGCC GAAAGTGGCG
GGTTCGAACT GA
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| Protein sequence | MADKKGSNSE KLLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EAAAAGVEAS
LSRSDLPSPQ EIRDILDQYV IGQERAKKIL AVAVYNHYKR LKHLDKKDDV ELSKSNILLI
GPTGSGKTLL AQTLARLLNV PFVIADATTL TEAGYVGEDV ENIIQKLLQN CNYEVDKAQR
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLVEGT MASVPPQGGR KHPNQDFIQV
DTTNILFICG GAFDGLEKVI TDRTEKTGIG FGATVKSKQE RDAGEVLRET EPEDLIKFGL
IPELIGRLPV VATLGKLDEA ALMKILVEPK NALVKQYHKL FAMERVELEI RPGALQAVAR
KAIRRKTGAR GLRSIIEQAL LDVMYELPAM KGVSKVIIDE NVIDGDGKPL LIYEDTPKVA
GSN
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