Gene BamMC406_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1837 
Symbol 
ID6176753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp2047299 
End bp2047904 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID641681594 
Productlysophospholipase 
Protein accessionYP_001808536 
Protein GI172060884 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.761054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.074561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCAC GAGCCGCGAC GGCGGCCCCG GCATCGGGCC AGGGCCGGCC CGCGCTCGTC 
GTGCTCGGCG ACAGCCTGTC GGCCGAATAC GGGCTGCCGC GCGACACCGG CTGGGTTGCG 
TTGCTGCGGC AACGGCTCGC GACCGAGCGA ATCGATTATA GCGTCGCGAA CGCAAGCATC 
AGCGGCGACA CCACGAGCGG CGGCCGCGCA CGGCTGCCGG CGGTGCTGCA ACGGCTCAAG 
CCGTCGATCG TCGTCGTCGA GCTCGGGTCG AACGACGCGC TGCGCGGCGT GCCGCTCGCA 
ACGACCGAAC AGAACCTGCG TGACATCATC GCCGATGCGC GGCAAGCGCG TGCGAAAGTC 
GTGCTGGTTG GCATGTACGT GCCGCCCAAC TACGGGCCCG ATTACACGCA GAAATTCCAT 
GCGCTCTATA CGCGGCTGTC GAAGGAACTC GGCGTACCGC TCGTGCCATT CCTCTTGGCC 
GGCATCGAGA ACAAGCCGGA AATGTTCCAG TCGGACCAGA TGCATCCCAC GCAGCAGGCG 
CAGGGCATCC TGCTCGACAA CGTCTGGCCC GCGCTGAAAC CGCTGCTCGG CAAACCGCGC 
GGCTGA
 
Protein sequence
MPARAATAAP ASGQGRPALV VLGDSLSAEY GLPRDTGWVA LLRQRLATER IDYSVANASI 
SGDTTSGGRA RLPAVLQRLK PSIVVVELGS NDALRGVPLA TTEQNLRDII ADARQARAKV 
VLVGMYVPPN YGPDYTQKFH ALYTRLSKEL GVPLVPFLLA GIENKPEMFQ SDQMHPTQQA 
QGILLDNVWP ALKPLLGKPR G