Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1800 |
Symbol | |
ID | 6177250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2006017 |
End bp | 2006799 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641681559 |
Product | TatD family hydrolase |
Protein accession | YP_001808501 |
Protein GI | 172060849 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.907271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTCG ATTCTCACTG CCACATCAAT TTCAAGGGTC TCGCCGACCG CCTGCCGGCC GTGCTGGAGA ACATGCGCGA GCACGACGTC ACGCACGCGC TGTGCGTGTC GGTCGACTTC GAGACGCTGC CCGACGTGCT CGCGATCGCG CAGGCGCACG ACAACGTCTA TGCGTCGGTC GGCGTGCATC CCGATCACGA GGACGCACGC GAGCCGACGC TCGCGGAACT GATCGAGCTG GCCGCGCACC CGAAGGTCGT CGCGATCGGC GAGACGGGCC TCGACTACTA CCGCCTCGAA GGCCGCTCGA TCGCCGACAT GGAATGGCAG CGCGAACGCT TTCGCACGCA TATCCGCGCG GCGACCGCGA CGATGAAGCC GTTGATCATC CATACGCGCG CGTCGTCGGA AGACACGCTG CGGATCATGG CCGAGGAGCG CGCGGACGTG CCGGGCGGCG TGATGCACTG CTTCACCGAG CCGTGGCCCG TCGCCGAGCA GGCGCTCGCG CAGAACTTCC ATATCTCGCT GTCGGGCATC GTCACGTTCA AGAACGCGAC CGACGTGCAG GACGTCGCGC GGCGCGTGCC GCTCGCGCGG CTGCTGATCG AAACCGACTC GCCGTACCTC GCGCCGGTGC CGTATCGCGG CAAGCCGAAT GAACCTGCGT ACGTCAGCCA TGTCGGACGT TTTATCGCAT CCGAGCGCGG GATCGCCGTC GAGGCGCTGG CCGATGCGAC GACGCAGAAC TTTTTCCGGC TGTTCAAGAT CGCCCGCTCA TGA
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Protein sequence | MFVDSHCHIN FKGLADRLPA VLENMREHDV THALCVSVDF ETLPDVLAIA QAHDNVYASV GVHPDHEDAR EPTLAELIEL AAHPKVVAIG ETGLDYYRLE GRSIADMEWQ RERFRTHIRA ATATMKPLII HTRASSEDTL RIMAEERADV PGGVMHCFTE PWPVAEQALA QNFHISLSGI VTFKNATDVQ DVARRVPLAR LLIETDSPYL APVPYRGKPN EPAYVSHVGR FIASERGIAV EALADATTQN FFRLFKIARS
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