Gene BamMC406_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1778 
Symbol 
ID6176568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1986374 
End bp1987000 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID641681537 
Producthypothetical protein 
Protein accessionYP_001808479 
Protein GI172060827 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTC GATTCATGCC CACCGAGGGC AAGTTCTTTG AACTCTTCAA CGCGCACGCG 
AAGCACATCG TTTCCGGTGG CCGCGAGCTC GAACTGCTGA TCGACAATCT CGCCGACGCC
GAGATTCACA AGCAAAACGT GCAAATCGCC GAGAAGGCCG CTGACAAGCT GACGCACGAA
GCGATCGATC TGCTGCACAA GACCTTCATC ACGCCGCTCG ATCGCGACGA GATCCACAAG
CTGATCACGA CGATGGACGA CATCCTCGAC CTGATGGAAG ACGTCGCGAC GGCCGTGTCG
CTGTACGACG TGCGCTCCGT CACGTCCGAG GCGAGCCAGC TCGCGCACAT CGTCACGCAG
TCGGCCCAGC ACGTGCAGCA GGCCGTCGCC ATGCTGTCCG ACATGAAGCA GTCGGCGCAG
ATCCTCAAGC AATGCGAAGA GATCGACCGC TGGGAGTCGG AGGCCGACCG CGTGCTGCGC
TCGGCGATGT CGAAGCTGTT CCGCGAGGAA GACGACGTGA AGACGCTCAT CAAGCTGAAG
GCGATCTACG AGCTGCTCGA GGAGATCACC GACAAGTGCG AGGACGTCGC GAACATCATC
GAAGGCATCG TGCTGGAAAA CGCCTGA
 
Protein sequence
MFGRFMPTEG KFFELFNAHA KHIVSGGREL ELLIDNLADA EIHKQNVQIA EKAADKLTHE 
AIDLLHKTFI TPLDRDEIHK LITTMDDILD LMEDVATAVS LYDVRSVTSE ASQLAHIVTQ
SAQHVQQAVA MLSDMKQSAQ ILKQCEEIDR WESEADRVLR SAMSKLFREE DDVKTLIKLK
AIYELLEEIT DKCEDVANII EGIVLENA