Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1726 |
Symbol | ndk |
ID | 6177193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1929772 |
End bp | 1930197 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641681485 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_001808427 |
Protein GI | 172060775 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.204847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCG AGCGCACCCT GTCGATCATC AAGCCGGATG CGGTGGCAAA GAACGTGATC GGTCAGATCT ACAGCCGTTT CGAAGGCGCC GGCCTGAAGA TCGTCGCATC GCGCATGGCT CACCTGTCGC GTGGCGACGC AGAGAAGTTC TATGCGGTTC ACGCAGCACG TCCGTTCTTC AAGGACCTCG TCGATTTCAT GATCTCGGGC CCGGTGATGA TCCAGGTTCT GGAAGGTGAA GGCGCGATCC TGAAGAACCG CGACCTGATG GGTGCGACGG ATCCGAAGAA GGCGGAAAAG GGCACGATCC GCGCCGACTT CGCCGACAGC ATCGACGCGA ACGCCGTGCA CGGCTCGGAC GCTGCCGAAA CGGCCGCGGT CGAAATCGCG TTCTTCTTCC CGGAAATGAA CGTCTACTCG CGCTAA
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Protein sequence | MAIERTLSII KPDAVAKNVI GQIYSRFEGA GLKIVASRMA HLSRGDAEKF YAVHAARPFF KDLVDFMISG PVMIQVLEGE GAILKNRDLM GATDPKKAEK GTIRADFADS IDANAVHGSD AAETAAVEIA FFFPEMNVYS R
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