Gene BamMC406_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1726 
Symbolndk 
ID6177193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1929772 
End bp1930197 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID641681485 
Productnucleoside diphosphate kinase 
Protein accessionYP_001808427 
Protein GI172060775 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.204847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCG AGCGCACCCT GTCGATCATC AAGCCGGATG CGGTGGCAAA GAACGTGATC 
GGTCAGATCT ACAGCCGTTT CGAAGGCGCC GGCCTGAAGA TCGTCGCATC GCGCATGGCT
CACCTGTCGC GTGGCGACGC AGAGAAGTTC TATGCGGTTC ACGCAGCACG TCCGTTCTTC
AAGGACCTCG TCGATTTCAT GATCTCGGGC CCGGTGATGA TCCAGGTTCT GGAAGGTGAA
GGCGCGATCC TGAAGAACCG CGACCTGATG GGTGCGACGG ATCCGAAGAA GGCGGAAAAG
GGCACGATCC GCGCCGACTT CGCCGACAGC ATCGACGCGA ACGCCGTGCA CGGCTCGGAC
GCTGCCGAAA CGGCCGCGGT CGAAATCGCG TTCTTCTTCC CGGAAATGAA CGTCTACTCG
CGCTAA
 
Protein sequence
MAIERTLSII KPDAVAKNVI GQIYSRFEGA GLKIVASRMA HLSRGDAEKF YAVHAARPFF 
KDLVDFMISG PVMIQVLEGE GAILKNRDLM GATDPKKAEK GTIRADFADS IDANAVHGSD
AAETAAVEIA FFFPEMNVYS R