Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1722 |
Symbol | hisS |
ID | 6177019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1924613 |
End bp | 1925953 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681481 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001808423 |
Protein GI | 172060771 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.50762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC AGAAACGCAA GATCGAGAAG CTCACCGGCG TCAAAGGCAT GAACGACATC CTCCCGCAGG ATGCCGGCCT GTGGGAGTTC TTCGAAGCCA CCGTGAAATC GTTGCTGCGC GCGTACGGCT ACCAGAACAT CCGCACGCCG ATCGTCGAAC ACACGCAGCT CTTCACGCGC GGCATCGGCG AAGTCACGGA CATCGTCGAG AAGGAAATGT ACAGCTTCAC CGACGCGCTG AACGGCGAGA ACCTGACGAT GCGCCCGGAG AACACCGCGG CCGTCGTGCG CGCGTCGATC GAGCACAACA TGCTGTACGA CGGCCCGAAG CGCCTGTGGT ACATCGGCCC GATGTTCCGT CACGAGCGTC CGCAGCGCGG CCGCTACCGC CAGTTCCACC AGGTCGGCGT CGAGGCGCTC GGCTTCGCGG GCCCGGATGC GGACGCCGAG ATCATCATGA TGTGCCAGCG CCTGTGGGAT GACCTCGGGC TGACCGGCAT CAAGCTCGAG ATCAACTCGC TCGGCCTCGC GGAAGAGCGG GCCGCGCACC GTGTCGAACT GATCAAGTAC CTCGAGCAGT TCGCCGACGT GCTGGACGAG GACGCGAAGC GCCGCCTGTA TACGAACCCG CTGCGCGTGC TCGACACGAA GAATCCCGCG CTGCAGGAAA TCGCGCAGAA CGCGCCGAAG CTGATCGACT TCCTCGGCGA CGAATCGCGC GCGCACTTCG AAGGGCTGCA GCGCCTGCTG CTCGCGAACA ACATTCCGTT CAAGATCAAT CCGCGTCTCG TGCGCGGCCT CGACTACTAC AACCTGACCG TGTTCGAGTG GGTGACCGAC AAGCTCGGCG CGCAGGGCAC GGTCGCGGCC GGCGGCCGCT ACGATCCGCT GATCGAGCAG CTCGGCGGCA AGCCGACCGC TGCATGCGGC TGGGCGATGG GCATCGAGCG CATTCTCGAA CTGCTGAAGG AAGAGGATCT CGCGCCCGAG CAGGAAGGTG TCGACGTGTA CGTGGTGCAC CAGGGCGAGA CCGCGCGCGA ACAGGCGTTC ATCGCGGCCG AGCGTCTGCG CGATACGGGC CTCGACGTGA TTTTCCACTG CAGCGCCGAC GGCGCGCCGG CAAGCTTCAA GTCGCAGATG AAGCGGGCCG ATGCAAGCGG TGCCGCGTTC GCGGTGATCT TCGGCGAAGA AGAGGTCGCG AACGGCACGG TGGGCGTGAA AGCGCTGCGC GGTGCGGGCG AGGAAGGGGA AAAGAACGTT CAGCAGACCG TACCGGTCGA AAGCTTGACC GAATTCCTAA TCAATGCGAT GGTTGCATCC GCCGAAGACG GCGACGACTG A
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Protein sequence | MTEQKRKIEK LTGVKGMNDI LPQDAGLWEF FEATVKSLLR AYGYQNIRTP IVEHTQLFTR GIGEVTDIVE KEMYSFTDAL NGENLTMRPE NTAAVVRASI EHNMLYDGPK RLWYIGPMFR HERPQRGRYR QFHQVGVEAL GFAGPDADAE IIMMCQRLWD DLGLTGIKLE INSLGLAEER AAHRVELIKY LEQFADVLDE DAKRRLYTNP LRVLDTKNPA LQEIAQNAPK LIDFLGDESR AHFEGLQRLL LANNIPFKIN PRLVRGLDYY NLTVFEWVTD KLGAQGTVAA GGRYDPLIEQ LGGKPTAACG WAMGIERILE LLKEEDLAPE QEGVDVYVVH QGETAREQAF IAAERLRDTG LDVIFHCSAD GAPASFKSQM KRADASGAAF AVIFGEEEVA NGTVGVKALR GAGEEGEKNV QQTVPVESLT EFLINAMVAS AEDGDD
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