Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1705 |
Symbol | |
ID | 6176054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1904608 |
End bp | 1905432 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681464 |
Product | competence lipoprotein ComL |
Protein accession | YP_001808406 |
Protein GI | 172060754 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.158652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAATT CGACCAAACG TACGGCCAAA ACCGTCGCCG CCCGAGCTGC GGCGGTAGCG GCCGCGGCCC TCATCGCCGG CTGCCACGGC TTACCGCAGA AGCAGGACGA GACGGCTACC TGGTCGAACA ACAAATTATA CTCAGAGGCC CAGGATGCAC TGTCCGGCGG CGACTGGGGC AAGTGCGCGA AATATTTCGA ATCGCTGCAA GGCCGCGATC CGTTCGGTCA TTTCGCGCAA CAGGCGCAGA TCAACGTCGC GTACTGCAAC TGGAAGGACA ACGAAGCGGC AGCCGCCGAC CAGGCCGTCG ACCGCTTCAT CCAGCTGCAC CCGGATCACC CGGATATCCC GTACGCGTAC TACCTGAAGG GGATGATCCA CTTCAACGAC GATCTCGGCC TGTTCGGCCG CTTCTCCGGC CAGGACATGA GCGAGCGCGA TCCGCAGGCA CTGCGCGAAT CGTACGATGC GTTCAAGGTC GTCGTCGACC GCTACCCGAA GAGCAAGTAT GCGCCCGACG CCGCGGCGCG GATGCGCTAC ATCGTCAACG CGCTCGCGTC GCACGAAGTC CACGCGGCCG ACTACTACTA TCGGCGCGGC GCCTACGTCG CGGCAATCAA CCGCGCGCAG CTCGCGATCA AGGACTACAA GGGCGCGCCG GCGATCGAGG ACGCGCTGCA CATCATGATC CTGTCGTACG GCAAGCTGAA CCAGCCGCAA CTCGCGGAAG ACACGAAGCG CGTGCTCGCG GGGACCTTCC CGGACAGCCC GTACATCACC GGCCACTCGC GCCCCGGCAC GAAGAAGTCG TGGTGGCAGT TCTGA
|
Protein sequence | MMNSTKRTAK TVAARAAAVA AAALIAGCHG LPQKQDETAT WSNNKLYSEA QDALSGGDWG KCAKYFESLQ GRDPFGHFAQ QAQINVAYCN WKDNEAAAAD QAVDRFIQLH PDHPDIPYAY YLKGMIHFND DLGLFGRFSG QDMSERDPQA LRESYDAFKV VVDRYPKSKY APDAAARMRY IVNALASHEV HAADYYYRRG AYVAAINRAQ LAIKDYKGAP AIEDALHIMI LSYGKLNQPQ LAEDTKRVLA GTFPDSPYIT GHSRPGTKKS WWQF
|
| |