| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1665 |
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| Symbol | |
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| ID | 6176070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1863990 |
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| End bp | 1865387 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681426 |
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| Product | PAS modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001808368 |
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| Protein GI | 172060716 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGC ACGACACCAT TCCGATCGTT CCCGCGCCGT CGCCCGCCGT CATGCCCGAC
GTGCGCGCAC TCGTCGCGTA TCTGGAACAG GATCCGCAGC CGATGATCGT CCTCGATCCC
GACTACCGCA TCCTCGCGGC GAACGATGCG TACCGGCGCC AGTTCGGCGT GGCGGGCGTC
GAGCACGTCG GCCGGCACTG CTTCCAGGTG TCGCATCACT ACGACGTGCC GTGCGACCAG
GCCGGCGAGC ATTGCCCGAT GAAGCAGGCG CTCGAGTCGC GCAGCCTGAA CCGCGTGCTG
CACATTCACC ATACGCCGCG CGGCCCCGAG CACGTCGACG TGGAATTGCG GCCGATCTTC
GACGCGCACG GCGGCGTGAT CGCGTACGTC GAGCGGCTGA CGACGGTGCG CAGTGCATCC
GCGCAGCCCA GCGCGGAAGG GCTCGTCGGC GGCGCCGACG CGTTCAATGC GGCGCTCGGC
GCGCTGCAGC GCGTCGCGCC GTCGATGCTG CCCGTGCTGC TGCTCGGTGA ATCGGGTACC
GGCAAGGAGC TGTTCGCGCG GGCGCTGCAC GAGGCGAGCG CGCGGGCGAT GGGGCCGTTC
GTGGTCGTCG ATTGTTCGGG CATCGCCGAG ACGCTGTTCG AGAGCGAGCT GTTCGGCTAC
GAGAAGGGCG CGTTTACCGG CGCGAACCAG CGCAAGCCGG GCCTCGTCGA GACCGCGCAG
GGCGGCACGC TGTTTCTCGA CGAAATCGGC GACGTGCCGC TGCCGATGCA GGTGAAGCTG
CTGCGGCTGA TCGAGTCGGG GACGTTCCGG CGCGTCGGTG GCGTCGAGGC GCTGCGCGCC
GATTTCCGGC TCGTCGCGGC CACGCACAAG CCGCTGCGCG AGATGATCGA CGACGGGCGG
TTCCGGCAGG ACCTCTACTA CCGGATCAAC GCGTTTCCGA TTCCGCTGCC GGCGCTGCGC
GAACGGCAGG GCGACGTCGC GCTGCTGGCC GAATCGATCC TGCGCCGCAT CGCGAACGCG
CGCGGCAACG CGGGCGATGC GAGCGCCCGG CCGTTCGCGG CCCGGCCATT TGTGCTGACC
GAGCGCGCAC GCGCGTGTCT CGATGCGTAT GCATGGCCCG GCAACATCCG CGAGCTGCGC
AATGTGCTCG AACGCGCGTG CCTGTTCGCG GACGACGGCA CGATCCGGGT CGAGCACCTG
CCGGCCGAAC TCGTCGCGGC GGCAGCGGCG CCGCACGAGC GTGACGCGGA CGCGCGCGGC
CTGTCGGACG CGGAGCTCGT GCGCATCGCG CGCACGTTCG ACGGCACGCG CAAGGCGCTT
GCCGAGCACG TCGGGATGAG CGAACGGACG CTGTACCGGC GGATGAAGGC GCTCGGCCTC
GGCTCGCGCG AGCGCTGA
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| Protein sequence | MNPHDTIPIV PAPSPAVMPD VRALVAYLEQ DPQPMIVLDP DYRILAANDA YRRQFGVAGV
EHVGRHCFQV SHHYDVPCDQ AGEHCPMKQA LESRSLNRVL HIHHTPRGPE HVDVELRPIF
DAHGGVIAYV ERLTTVRSAS AQPSAEGLVG GADAFNAALG ALQRVAPSML PVLLLGESGT
GKELFARALH EASARAMGPF VVVDCSGIAE TLFESELFGY EKGAFTGANQ RKPGLVETAQ
GGTLFLDEIG DVPLPMQVKL LRLIESGTFR RVGGVEALRA DFRLVAATHK PLREMIDDGR
FRQDLYYRIN AFPIPLPALR ERQGDVALLA ESILRRIANA RGNAGDASAR PFAARPFVLT
ERARACLDAY AWPGNIRELR NVLERACLFA DDGTIRVEHL PAELVAAAAA PHERDADARG
LSDAELVRIA RTFDGTRKAL AEHVGMSERT LYRRMKALGL GSRER
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