| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1659 |
|---|
| Symbol | |
|---|
| ID | 6177314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1855483 |
|---|
| End bp | 1856103 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641681420 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001808362 |
|---|
| Protein GI | 172060710 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAC AGCGCTTAAC TCGCGAGCAG AGCCGGGACC AGACGCGCGA GCGTCTGCTG
AAAGCCGCGC ACCGGATTTT TCTGAAGAAA GGCTATGTCG CCGCGAGTGT CGAGGACATC
GCGGCTGCCG CCGGCTATAC GCGCGGCGCG TTCTACTCGA ATTTCCGCAG CAAGTCGGAG
CTGCTGCTCG AGCTGCTCGA GCGCGACCAT GATTCGGTGC GGGCCGATTT CGAGGCGATC
TTCGAGGAAG GCGGGCCGCG CGAGCAGATG GAGTCGACGG CGCTCGCGTA CTACAGCACG
CTGTTTCGCG ACGACGAGTA TTCGCTGCTA TGGGGCGAGG CGAAGCTGCA GGCGGCGCGC
GACGCGAAGT TCCGCGTGCG CTTCAACCAG TTCCTGCACG GCAAGCGGCT GCAGATGGCC
GAGTTCATCC AGCGCTTCGC CGAGCGCGCG GGCACGCCGC TGCTGCTGCC GGCCGATACG
CTCGCATTCG GGCTGATGTG CCTGTGCGAC GGCGTGCAGT CGTATTACAC GGCCGATCCG
CAGCACGTGT CGGCCGACGC GGCCGAAGCC GTGCTGGCGG GGTTCTTCGC ACGGGTCGTG
CTGGGGCGCG TGCCGGGCTG A
|
|---|
| Protein sequence | MKPQRLTREQ SRDQTRERLL KAAHRIFLKK GYVAASVEDI AAAAGYTRGA FYSNFRSKSE
LLLELLERDH DSVRADFEAI FEEGGPREQM ESTALAYYST LFRDDEYSLL WGEAKLQAAR
DAKFRVRFNQ FLHGKRLQMA EFIQRFAERA GTPLLLPADT LAFGLMCLCD GVQSYYTADP
QHVSADAAEA VLAGFFARVV LGRVPG
|
|---|
| |