| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1549 |
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| Symbol | |
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| ID | 6175989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1724583 |
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| End bp | 1725605 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641681310 |
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| Product | fimbrial protein |
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| Protein accession | YP_001808252 |
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| Protein GI | 172060600 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0623048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.894939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG CCACGCGTGA ACGGCACATG CCGGCGGCAT GGTTGCGCTG GATCGTGCTC
GCATTGTTCG TTGTGGCGGC GCAGCCCGCG TGGGCATTGC GGTGCCTGAC CAACAGCGGC
GCGACTTCGC TGACCGAACC GATCGGCGGC GTGGCGTCGT ATCCGACCGA CGCGCCGGAT
GGCTACGTGA TCTGGGTTTC TCCGGTGCGC ACGACGACGG GGTATTGCTA CAAGGATCTC
GGTGACGCGG GCAGCCTGAG AGTCGTCGAC AACATCTATT TCTACGCGAA CCCGAATCGC
ACGGACCCGG CCGCGTGGGG GCTCGAGATC GGCATCCGCT ACCGCGGCAT CGACTATTTC
GACAAGACGA GCAATCGCGG CGGCGGCGTG TTTACCGGCT ATTCGGTGCC GCCGTGCAGC
CGGTACGATT TCGACCGCGG GCGTTGCCAG CAGACCCGCA TCAGCATCGA CTATCAGGTC
GTCGTGCGCA AGAAGGGCAA CTGGGTCCAG CCGCCGAGCG ATATCTACAC GGTCTTCCAG
TTCGACGGCG AGTTCGGGCT GAATGCGTAC AGCCCGAGCT TCCAGTACCG GCTGAGCGGC
CTGCGCAACC TCAAGCCGAC GCCGTGTTTC GTCGACGTGC TCGTCACGCC CGAACCGGGC
GTCGTCAATT TCGGGCAGGT GCAGGCGGCC GGTAACGGCT TCATGCCGGC GGTGCCGCGC
AAGCGGTTCT CGCTGTCGTT GACCAAGAAA TGCAACGTCG CGGTGCGGGT CGACGGGTAT
TTCGAAACGA GCTTTCCGGT CCAGAACGGC TTGTTGGTGC CGGCGAAGGA CAGCAATTTC
GGTATCGGCA TCGAGGACAG CCAGGGCAAG GCCATTCCGT TCAATCAGCA ATTCACGCTG
GCGCAGTTCG CGTCCAACGT GATGAATCAA AGCGTGGTGA TGGACGCGGT GCTGAAATCG
TTCGGCCCGC CGAAGCTCGG GCGATTCGAT GCGACCGCAA CGATCCGGTT GTTCATCTAC
TGA
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| Protein sequence | MSGATRERHM PAAWLRWIVL ALFVVAAQPA WALRCLTNSG ATSLTEPIGG VASYPTDAPD
GYVIWVSPVR TTTGYCYKDL GDAGSLRVVD NIYFYANPNR TDPAAWGLEI GIRYRGIDYF
DKTSNRGGGV FTGYSVPPCS RYDFDRGRCQ QTRISIDYQV VVRKKGNWVQ PPSDIYTVFQ
FDGEFGLNAY SPSFQYRLSG LRNLKPTPCF VDVLVTPEPG VVNFGQVQAA GNGFMPAVPR
KRFSLSLTKK CNVAVRVDGY FETSFPVQNG LLVPAKDSNF GIGIEDSQGK AIPFNQQFTL
AQFASNVMNQ SVVMDAVLKS FGPPKLGRFD ATATIRLFIY
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