| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1546 |
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| Symbol | |
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| ID | 6176034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1720736 |
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| End bp | 1721248 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681307 |
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| Product | fimbrial protein |
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| Protein accession | YP_001808249 |
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| Protein GI | 172060597 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.114826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.375148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CCCTCCTGAG CGCGGTCGCA CTTGCAGCCC TGTCCACCTC GGCCTTCGCA
GCGGGCACCG GCACGATCAA CTTCACGGGC GAGATCGTCG CGGGCGCATG CGGCATCGAT
TCGAACTCCG TCAACCAGAC CGTGCAGCTC GGCAAGGTGC CGACCAACAA GTTCAAGCAA
GCCGGCGACA AGTCGGACGC GGTGTCGTTC GACATCAAGC TGACCGACTG CGACACCAGC
ATCGCGCAGA ACGCGTACTT CACGTTCACG GGCACGTCGA GCGCGGGCCA GCCGAAGCTG
CTCGCGACGA TCGGTTCGGC AACCAACGTC GGCATCCGCC TGCAGTCCGC ATCGGGCGAA
TACCTCGACA ACGGCGCCGA GCAGAAGGCG CCGACCCTGC TGCAAAACGG CACCAACATC
GCGCGCTTCG CGGCGATGTA CGAAGCCACG GCCGCCGGCG TGACGCCGGG TACGGCCGAC
GGCGTCGCGA ACTTCACGGT CCGCTACCAG TAA
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| Protein sequence | MKKSLLSAVA LAALSTSAFA AGTGTINFTG EIVAGACGID SNSVNQTVQL GKVPTNKFKQ
AGDKSDAVSF DIKLTDCDTS IAQNAYFTFT GTSSAGQPKL LATIGSATNV GIRLQSASGE
YLDNGAEQKA PTLLQNGTNI ARFAAMYEAT AAGVTPGTAD GVANFTVRYQ
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