| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1533 |
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| Symbol | |
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| ID | 6177644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1700253 |
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| End bp | 1701011 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641681294 |
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| Product | Pili assembly chaperone, N-terminal |
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| Protein accession | YP_001808236 |
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| Protein GI | 172060584 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.981289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.941111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTGT CAATTCGTTA TCCTTATTTT CAAGTCGTGG CCGGTGTCAT GGCGTGGGCC
GCCTGCGCCA CGCTGGCGCA GGCGGCGCTT TTGCTGGACG GTACCCGGGT GGTTTTCCCC
GAGCACGCTC GCGACGTGAC GGTCCGGATG GAAAATTCCG GCACCGAACC GGTACTCGCA
CAGAGCTGGA TCGACGACGG TCGCGCCAAC GTTCCGCCCG AACAGATGCG CACGCCGTTC
GTGGTTGCGC CGACACTGGT TCGCGTCGAA GCGGGGAGGG GCGCCGTGCT GCGCATTACG
AACATGCAGG CGCAGTTGCC CGTCGACCGT GAATCGGTGT TCTGGCTGAA TGTGCTCGAA
GTGCCGACGG TACGGCAAGA CACCGACAAC CAGCTGCGCT TCGCGTTCCG AACCCGCATC
AAGATGTTTT ACCGGCCCGC GTCGCTCGCG AACGACGTCG AAACGGCGCA GGAAAAGCTG
GTCTGGAAGG TGTCGGCCGA CGCGTCGCAC GCAGGCGGAC GGCAGATCTC GCTCGAGGTT
TCCAATCCGA CACCGTATTA CGTGTCGTTC GGGATGGTCG AGGGCGACGT CAGCGGCACG
TTCATCCCGG CCGGTGGCGG GATGGTCGCG CCATTCGGCT CCCAGCGCTT CCCGTTGCCG
GGCGCTGCCG CGCAGTCGCA TCGCCCGACG GCCGTGCGCT ACATGACCAT CGACGACTAT
GGCGGGCGCA GCACGATAAC CAAAAAATTG ACCGACTGA
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| Protein sequence | MILSIRYPYF QVVAGVMAWA ACATLAQAAL LLDGTRVVFP EHARDVTVRM ENSGTEPVLA
QSWIDDGRAN VPPEQMRTPF VVAPTLVRVE AGRGAVLRIT NMQAQLPVDR ESVFWLNVLE
VPTVRQDTDN QLRFAFRTRI KMFYRPASLA NDVETAQEKL VWKVSADASH AGGRQISLEV
SNPTPYYVSF GMVEGDVSGT FIPAGGGMVA PFGSQRFPLP GAAAQSHRPT AVRYMTIDDY
GGRSTITKKL TD
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