Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1485 |
Symbol | |
ID | 6176405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1652256 |
End bp | 1653068 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641681245 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001808188 |
Protein GI | 172060536 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGA AAACGTCGAC GACGGGCGCC GCCGTGGCCG CCCGCGCGTG GCGCGCGATC GCGCCGTGGC TCGTGCCGCT CGCGCTGCTG GTCGTGTGGG AGGTCGGCGC GCGCGTCGGC TGGCTGTCGA CCCGCGTGCT GCCCGAACCG GTGGCGGTCG TGCGCGCCGC ATGGTCGCTC GTGACGTCGG GCGAAATGTG GGCGAATGTG AAGGTCAGTA CCTGGCGCGC GCTGTTCGGT TTCGCGATCG GCGGTGGTGT CGGCCTGGCG CTGGGCCTTG CGACCGGCCT GTCGAAAGCG GCGGAGGTCG CGCTCGATTC GACGATCCAG ATGATCCGCA ACATCCCCGC GCTCGCGATG ATTCCGCTCG TGATCCTGTG GTTCGGCATC GACGAGAAGG CGAAGCTGTT CCTCGTCGCG CTCGGTGTGT TCTTCCCCGT CTACATCAAC ACGTATCACG GGATCCGCTC GGTCGACGCA AACCTGATCG AGATGGCGAA GAGCTACGGC GTGCGCGGCT TCGCGCTGTA TCGCGATGTG ATCCTGCCCA GCGCGTTGCC GTCGATTCTC GTCGGCGTGC GCTTCGCGCT CGGGCTGATG TGGGTGATGC TGATCGTCGC GGAAACGATT TCCGCGCAGT CGGGCATCGG CTACATGACG ATGAACGCGC GCGAATTCCT GCAAACCGAT GTGGTGGTGG TCGGCATCCT GCTGTATGCG GTGCTCGGCA AGCTGGCCGA CGTGCTGGCG AAATGGATCG AGCGCACGAC GCTGCGCTGG CACCCCGCTT ATCAATCAGG AGCAAAGGCA TGA
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Protein sequence | MTTKTSTTGA AVAARAWRAI APWLVPLALL VVWEVGARVG WLSTRVLPEP VAVVRAAWSL VTSGEMWANV KVSTWRALFG FAIGGGVGLA LGLATGLSKA AEVALDSTIQ MIRNIPALAM IPLVILWFGI DEKAKLFLVA LGVFFPVYIN TYHGIRSVDA NLIEMAKSYG VRGFALYRDV ILPSALPSIL VGVRFALGLM WVMLIVAETI SAQSGIGYMT MNAREFLQTD VVVVGILLYA VLGKLADVLA KWIERTTLRW HPAYQSGAKA
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