Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1462 |
Symbol | |
ID | 6177277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1626510 |
End bp | 1627460 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641681219 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001808166 |
Protein GI | 172060514 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.081481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA CGTTCCCCCG CCTGATCGTA TTCGGCGAAG CGCTGACCGA TTTCATCCGC GACGATGCGC ACCACTGGCG CAGCGTCGCC GGCGGCTCGT GCTGGAACGT CGCGCGCGTC GGCGCGCGGC TCGGCGTGCC GACCGCGTTC GCCGGCACGG TCAGCCGCGA CATCTTCGGC GACGAACTGA TGCGCCGCAG CGCCGATGCC GGGCTCGACC TGCGTTTCAT GCGACAGGTC GATCGCCCGC CGCTGCTCGC GATGGTCGTG TCGAAACAGC CGCCCGACTA TTTCTTCATC GGCGAGAACA GCGCCGACCT CGCGTTCGAT CCGGCCGACC TGCCCGCTGG CGCGCTCGAC GCGGCCGAGA TCGTGCACGT GGGCTCGCTC GGCGTCGTGC GCGAGCCGCT CGCGCCGCGA CTGATCGAAG TCGTGCGGGC TGCCCGCGTG GCCGGCAAGC GGATCTCGTT CGACCCGAAC TATCGCGCGC CGATGGCCGC GCCGTCGTAT CGCGACACGC TGCGCACGCT GGCCGGTCTC GCCGACTGGA TCAAGGTATC CGATGAAGAT CTGCGCGGCC TGTTTCCCGA ACTCGATGAA GCCGCCGCGC TCGCGCAATT GTGCGCCTGG GCGCCCGATG CGACCGTGCT CGTCACGCGC GGCGCAGCCG GCATGCAACT CCTGCACCGC GACACCGCGC TGTTTCAGCC GGCGTTCGCG ACCGACGTCG CCGACACCGT CGGCTGCGGC GACGCCAGCA TCGGCGGCTG GCTCGCGAGC CAGCTCATGC ATCCCGGCGC ATCGGCCGCC GACCATCTAC GCTACGCGGC AGCCTGCGCG GCGGTCGCCT GCGCGCATGC GGGCGCGTAT GCGCCGACCG CTGCCGAAGT CGCCGACGTC ATCGCCGGCC GCGCGAGCGC CGAAGCAGCT GACGCCGCGC TGTCGCACTA G
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Protein sequence | MTTTFPRLIV FGEALTDFIR DDAHHWRSVA GGSCWNVARV GARLGVPTAF AGTVSRDIFG DELMRRSADA GLDLRFMRQV DRPPLLAMVV SKQPPDYFFI GENSADLAFD PADLPAGALD AAEIVHVGSL GVVREPLAPR LIEVVRAARV AGKRISFDPN YRAPMAAPSY RDTLRTLAGL ADWIKVSDED LRGLFPELDE AAALAQLCAW APDATVLVTR GAAGMQLLHR DTALFQPAFA TDVADTVGCG DASIGGWLAS QLMHPGASAA DHLRYAAACA AVACAHAGAY APTAAEVADV IAGRASAEAA DAALSH
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