| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1461 |
|---|
| Symbol | |
|---|
| ID | 6176493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1624754 |
|---|
| End bp | 1626472 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641681218 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_001808165 |
|---|
| Protein GI | 172060513 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.297634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG CCTCGCCCCG TCCGGATGCC GGCCCGCAGC ATCCCGAGCA TTTCGCCGCA
CTCGATGCGG CAACGCCGCG GCCCACGCGG CGCATCGGCC TTGACGCGCT GGCCGGTCTG
TCGATCGCCG GGCTGCTGAT TCCGGAGGCG GTCGCGTATG CGGGGCTCGC CAACCTGCCG
CCGCAGGCCG GTCTGATCGC ACTGCTGTCG GGGCTCGTGG TGTATGCGCT GACCGGCAGC
AGCCGCTTTG CGATCGTGTC GTCGACCTCG TCGTCGGCGG CCGTGCTCGC GGCGACCGTG
CTGGCCGAAT CGGGGATCGC GCTCGCCGCG CAACTCGCGC TGGCGGCCGC ACTCGTCGCG
ATGACCGGCG TGCTGTTCAT CCTGGCGGGC GCGGCACGGC TCGGCGGCAT GTCGGATTTC
GTCGCGCGGC CGGTCCTGCG CGGGTTCACG TTCGGACTGG CGCTGACGAT CGTCCTCAAG
CAACTGCCGA AGATCCTCGC GATTACCGTG CAGCACAGCG ATGCGCCGCA TGTCGCCCTC
GACCTCATCG CCGGTGCGCC GCGTGCGAAC CTCGCGAGCG TCGCGCTCGG CGGGAGCGCG
CTTGCACTGC TGTTCCTGCT CGGCCGCAGC AAGCGGGTGC CGGCCACGCT CGTCGTGATC
GTGCTGTCGA TCGCGGCCGG CTATATGGTC GACTGGCAAC ACTACGGGAT CGCGATCGTC
GGACACATCG ATTTCCAGCA CCTCGCATTC GGGCTGCCGC AACTCGACCG CAACGCATGG
ATGCAGACGG TCGAGCTCGC TTTCGCGCTG ATGCTGATCC TGTATGCGGA GTCGTACGGA
TCGATCCGCA ACTTCGCGCT GAAGCACGGC GACAGCGTGT CGCCGAACCG CGACCTCGTC
GCGCTCGGCT GCGCGAACCT CGTGTCGGGG CTGCTGCACG GGATGCCGGT CGGCGCCGGC
TATTCGGCGA CAGCGGCGAA CGAGGCGGCC GGCGCGCAAT CGCGTTTGTC GAGCCTGTGG
GCTGCCGGCG TGGTCGCGCT GATCGTATGG CTGCTGCTGC CGCAGCTCGC GCGTACGCCG
GAGCCCGTGC TCGCGGCTAT CGTCATCTTC GCGGTCAGCC ATTCGCTGCA TCCGTCGGTG
TTCCGGCCGT ACTGGGTCTG GCATCGCGAC CGGCTCGTCG TGGCCGCCGC GCTGCTCGCC
GTGCTCGTGC TCGGCGTGCT GCACGGGCTG CTCGCGGCCA TCGGCGTGAG CCTGCTGCTG
ACGCTGCGCA AGTTGTCGGA GCCGAACGTC AGCGTGCTCG GCCGGCTGCG CGACGGGCAC
GACTTCGTCG ACGTCGCGAA TCACGCCGAT GCGAAGCCGA TACCCGGCGT GCTGATCGTG
CGGCCCGAGG CGCAGCTGTT CTTCGCGAAC GCCGACCGGA TGCTCAATCG CGTGCGCGCG
CTGCTGAAGG CCGCGCCCGA TACGCATACC GTGATGCTGA GTCTCGAGGA AACGCCGGAC
GTCGACGGCA CGACGATCGA GTCGTTGCGC ACGTTCGCGG CCGAATGCGC GGCACGCGGG
CTGCAGTTCG CGATCGTGCG GCTCAAGGAG CACGCGCTGC ATGCGCTGAG TCGCGCGACC
GACGACACGC TGCGTGACGC GGCGATGTCC GAGCTGAGCG TCGACGAAAG CCTGCAACTG
GTGCAGGCGC GCGGCCATGT CGAGAAGGGC GGCGCGTGA
|
|---|
| Protein sequence | MTTASPRPDA GPQHPEHFAA LDAATPRPTR RIGLDALAGL SIAGLLIPEA VAYAGLANLP
PQAGLIALLS GLVVYALTGS SRFAIVSSTS SSAAVLAATV LAESGIALAA QLALAAALVA
MTGVLFILAG AARLGGMSDF VARPVLRGFT FGLALTIVLK QLPKILAITV QHSDAPHVAL
DLIAGAPRAN LASVALGGSA LALLFLLGRS KRVPATLVVI VLSIAAGYMV DWQHYGIAIV
GHIDFQHLAF GLPQLDRNAW MQTVELAFAL MLILYAESYG SIRNFALKHG DSVSPNRDLV
ALGCANLVSG LLHGMPVGAG YSATAANEAA GAQSRLSSLW AAGVVALIVW LLLPQLARTP
EPVLAAIVIF AVSHSLHPSV FRPYWVWHRD RLVVAAALLA VLVLGVLHGL LAAIGVSLLL
TLRKLSEPNV SVLGRLRDGH DFVDVANHAD AKPIPGVLIV RPEAQLFFAN ADRMLNRVRA
LLKAAPDTHT VMLSLEETPD VDGTTIESLR TFAAECAARG LQFAIVRLKE HALHALSRAT
DDTLRDAAMS ELSVDESLQL VQARGHVEKG GA
|
|---|
| |