Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1457 |
Symbol | |
ID | 6176910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1620863 |
End bp | 1621693 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681214 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001808161 |
Protein GI | 172060509 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.166824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAA TTCAGGAGGG ACGATCGTCC GCGGGACGGC CGTCCGGGAC GCGGGCACCC GGCAATCGGC AGGCCGGCGG AACGAAGGCA CGCATCCTCG ATGCGGCCGA GGACCTGTTC ATCGAGCATG GCTTCGAGGC GATGTCGATG AGGCAGATCA CGTCGCGCGC GGCGGTGAAC CTGGCCGCGG TCAACTACCA CTTCGGCAGC AAGGAAGCGT TGATCCACGC GATGCTGTCG CGTCGGCTCG ACCAGCTCAA CCAGGAACGC CTCGGCATCC TCGACCGCTT CGATGCGCAG CTCGGTGCGC ACATCACTTG CGAGCACGTA CTCGGCGCGA TGTTCATTCC CGCATTGAAG GCGTCGCGCG ACCCCGATCG CGGCGGCCCC GCGTTCCTTC GCTTGATCGG CCGCGCGTAC ACCGACCCGT CGCCGTTCGT GCGCAACTTC CTGACCGCGC ACTATGCGAG CGTCGCGGGC CGCTTCTTCG ATGCGTTCCA GCGCGCGCTG CCGCATCTGC CGCGCACTGA GCTCGGCTGG CGGCTGCACT TCGCGATCGG CGCGCTGTCC GGCGCGCTGG CCGGTGCCGA AACCGAAAGC CTGATCGACG AATTCTCGCA ACGCCGCACG ATGAACGACG TGCAGATGAT CGCGCGGCTG TCGTCGCTGA TCGTCGCCGC GCTGAAGGCG CCGATGCCCG ACAGCACGCA GCTGTCGATC TTCGCGGCCG TGCTCGACGA TGCGGGCGCG AGCGAAGCGT TCGGGCTGTC GCCGGGTGCG GGCACAGCCG CGGCCTCGGC CGATACGGCG GCCGCACATT CGGCGAGCTG A
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Protein sequence | MAVIQEGRSS AGRPSGTRAP GNRQAGGTKA RILDAAEDLF IEHGFEAMSM RQITSRAAVN LAAVNYHFGS KEALIHAMLS RRLDQLNQER LGILDRFDAQ LGAHITCEHV LGAMFIPALK ASRDPDRGGP AFLRLIGRAY TDPSPFVRNF LTAHYASVAG RFFDAFQRAL PHLPRTELGW RLHFAIGALS GALAGAETES LIDEFSQRRT MNDVQMIARL SSLIVAALKA PMPDSTQLSI FAAVLDDAGA SEAFGLSPGA GTAAASADTA AAHSAS
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