| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1442 |
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| Symbol | |
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| ID | 6178526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1604250 |
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| End bp | 1605185 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681199 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001808146 |
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| Protein GI | 172060494 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.257298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA ATCTGACAAA AATCATCGCG GGGTTGCTGA TTGCGATCGC TGTTCTGCTC
GGAATCTACG CATGGATGCT GGGGCGCAGT GCGTCGCAGC CGGCTCCTGT ACAGCAGGTC
ATCGCTGCGA GCCCGGTACC TGTGGTTGTC GCGACGCGTG CGCTACCGGT CGGTCAGCCG
ATTGCTGCCG ATGCATTGAA GGTTCAACCG ATCGCTCCAG TGCCGACAGG TGCGTTTGCC
GATCCGGCCA TTCTGGTCGG TCGCGTTCCT GCAAGGGACA TCCCGGCGTC GGCCCCGGTC
GTGTCGGACT CCTTGGTGTC CGGGCTGGCG GAGGACGTTC AGCCGGGCGA ACGCGCGATT
GCGATTCGTG TCGATGAAAC CAATGCCGTC GGCAACCGCC TGCGGCCGGG CAACTTCGTC
GACGTATTCG TGAACTTGAA GCGTGAAGCG AGCGGCCCGA TGCTCGACGG CGAGGTTTCG
CAGACGCAAG CGCGGCTCCT GATGTCGAAG GTGCGCGTGC TGTCGTTCGG CGACGCGACG
CCGGAACGTG ACAGCGGCAG CAACACGAAC GGCAACAACG GTCAGCCGAG TAGTGCGCGC
ATCGCGGTAC TCGCGGTACC GACCGCACAG GTCGATGCCC TGACGCTCGG CGAGTCGAGC
GGCCGATTGA CGCTCGCGCT GCGCAACCCG CGCGACGACG AGCTTGCGAC GCAGACGGTG
GCGGTGCGCA CGGACAACAA GCTGTCGCCG TCGGCGCTTG CCGCGGTCGG CGTATCGCTG
CAACAGCTGT CGGGCACGTC GAGGACCGCA GTGGCCAACG TGAATGTGCC ACCACTACCG
TCGCGCCCGC CGCTGATGGT GCGGTCAGGC GGTAGCGGAG GCGGGGGCGG CATCGAAGTG
ATCCGCGGCG GCCGGTCGGA AACGGTTTTG TATTGA
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| Protein sequence | MANNLTKIIA GLLIAIAVLL GIYAWMLGRS ASQPAPVQQV IAASPVPVVV ATRALPVGQP
IAADALKVQP IAPVPTGAFA DPAILVGRVP ARDIPASAPV VSDSLVSGLA EDVQPGERAI
AIRVDETNAV GNRLRPGNFV DVFVNLKREA SGPMLDGEVS QTQARLLMSK VRVLSFGDAT
PERDSGSNTN GNNGQPSSAR IAVLAVPTAQ VDALTLGESS GRLTLALRNP RDDELATQTV
AVRTDNKLSP SALAAVGVSL QQLSGTSRTA VANVNVPPLP SRPPLMVRSG GSGGGGGIEV
IRGGRSETVL Y
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