| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1422 |
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| Symbol | infB |
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| ID | 6177459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1577403 |
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| End bp | 1580321 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681179 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001808126 |
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| Protein GI | 172060474 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0279549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGTA ACAACGTAGC CCAATTTGCC GCGGAACTGA AAATGCCTGC TGGTGTGCTG
CTCGAACAGC TGCAGGCAGC GGGCGTCCAG AAAGCGAGTG AAGACGATGC GCTGTCCGAG
GCGGACAAGG CGCGTCTGCT CGATCATTTG CGCAAGTCGC ACGGCGCAAC CGACGGCGAC
AAGCGCAAGA TCACGCTGAC CCGCAAGCAT ACGTCGGAGA TCAAGCAATC TGACGCGACG
GGCAAGGCTC GCACCATTCA GGTCGAGGTC CGCAAGAAGC GTACGTTCGT CAAGCGCGAC
GACGTGGCCG AAGGTGCGGA ACAGGGTCAG GCACAGGTCG CCGAAGCGGA CGACGATGCG
GAACTGAAGC GTCGCGAGGA AGAAGCGCGC CGCGAGGCCG AACTGCTCGA GAAGCAGGCG
CAGGAACTGC GCGAGCGCCA GGAACGCCTC GAGCGCGAGG AAGCCGAGCG CCGCGCCCGC
GAGGAAGCGG CCGAAGCCGA GCGCCGTCGT GCCGAGGAAG AAGCGGCAGC GAAGCGTGCC
GCGGCTGCAG CCGTAGAGGC ACAGCAGGCT GCTGCCCAGC AGGCCGCCGA GGCTCAGCAG
GAAACGGCCG GTGCGCAGTC CGCGCAGGAC GAAGCACGCG CGGCCGCCGA ACGTGCGGCC
CAGCGCGAAG CAGCGAAGAA GGCCGAGGAC GCTGCCCGCG AGGCGGCGGA CAAGACGCGC
GCCGAGCAGG AAGAGATTCG CAAGCGTCGC GAGGCGGCCG AGGCCGAAGC GCGCGCGATC
CGCGAAATGA TGAACACGCC ACGCAAGGCC GTGGTCAAGG CAGTCGAGCC GCCGAAGCCG
GTGGAACCGC CGAAGCCGGT CGAAGCGAAG GGCACGCTGC ACAAGCCGGC AAAGCCGGCG
GGCGCAGGCG CGGCACGTCC GGCCGTGAAG AAGCCGGCCG GCGCGGCGCC GGCGACCACG
CAGGCACCGG CAGGTGCGGG CGACCGCAAC AAGAAGCCGG GTGGCGGCAA GGGCGGCTGG
CAGGACGACG CAGCCAAGCG CCGTGGCATC AAGACGCGCG GCGATTCGAG CGGCGGCGTC
GACCGCGGTT GGCGCGGCGG CCCGAAGGGC CGTGGCCGTC ACCAGGACAG CGCATCGACG
TTCCAGGCAC CGACCGAACC GATCGTGCGT GAAGTGCACG TGCCGGAAAC CGTCTCGGTT
GCCGATCTCG CGCACAAGAT GTCGATCAAG GCCTCGGAAG TCATCAAGGT GATGATGAAG
ATGGGCCAGA TGGTCACGAT CAACCAGGTG CTGGACCAGG AAACGGCGAT GATCGTCGTC
GAGGAACTGG GCCACCGCGC GGTTGCCGCG AAGCTGGACG ATCCGGAAGC GCTGCTGGTC
GAAGGCGAGG CCACCACCGA TGCGGAGCAG CTGCCGCGTC CGCCGGTCGT CACCGTGATG
GGCCACGTCG ACCACGGCAA GACCTCGCTG CTCGACCACA TCCGCCGCGC GAAGGTTGCA
GCGGGCGAAG CGGGCGGCAT TACGCAGCAC ATCGGCGCAT ACCACGTCGA AACGCCGCGC
GGCGTCATCA CGTTCCTCGA TACGCCGGGT CACGAAGCGT TCACGGCAAT GCGTGCACGC
GGCGCGAAGG CGACCGACAT CGTGGTGCTG GTGGTGGCTG CCGACGACGG CGTGATGCCG
CAGACGAAGG AAGCCATCGC TCACGCGAAG GCGGGTGGCG TGCCGATCGT CGTGGCGATC
AACAAGATCG ACAAGCCGGA AGCGAACCCG GACCGCGTCA AGCAGGAACT GGTCGCGGAA
GGCGTCGTGC CGGAAGAATA CGGTGGCGAT TCGCCGTTCG TGCCGGTGTC GGCGAAGACG
GGCGTCGGTA TCGACGACCT GCTCGAGAAC GTGCTGCTGC AGGCCGAAGT GCTGGAACTG
AAGGCACCGA TCGAGGCGCC GGCCAAGGGC ATCGTGATCG AAGCGAAGCT GGACAAGGGC
AAGGGCCCGG TCGCGACGAT CCTGGTGCAG TCGGGTACGC TGAACCGCGG CGACGTCGTG
CTCGCAGGCT CGGCTTATGG CCGCGTGCGT GCGATGCTCG ACGAGAACGG CAAGCCGACG
AAGGAAGCCG GCCCGTCGAT CCCGGTCGAA ATCCAGGGTC TGTCGGAAGT GCCGGGTGCC
GGTGAGGAAG TGATCGTTCT GCCGGACGAG CGCAAGGCGC GCGAAATCGC GCTGTTCCGC
CAGGGCAAGT TCCGCGACGT CAAGCTGGCG AAGCAGCAGG CCGCGAAGCT GGAAAGCATG
CTCGAGCAGA TGGGCGAAGG CGAAGTGCAG AACCTGCCGC TCATCATCAA GGCGGACGTG
CAGGGCTCGC AGGAAGCGCT CGTGCAGTCG CTGCTCAAGC TGTCGACCGA CGAAGTGCGC
GTGCAGATCG TGCACAGCGC GGTGGGTGGC ATCAGCGAAA ACGACGTCAA CCTCGCGACG
GCATCGAAGG CGGTCATCAT CGGCTTCAAC ACGCGTGCGG ATGCACAGGC GCGCAAGCTG
GCCGAATCGA ACGGTATCGA CATCCGCTAC TACAACATCA TCTACGACGC AGTGGATGAG
GTGAAGGCCG CGATGTCGGG CATGCTGGCG CCGGAGAAGC GCGAAGTCAT CACCGGTATG
GTCGAGGTAC GCCAGGTGTT CAAGGTGCCG AAGATCGGCA CGGTCGCCGG CTGTATGGTC
ACGGACGGTA TCGTCAAGCG CTCGTCGTCG GTGCGCGTAC TGCGCAACAA CGTCGTGATC
TTCACGGGCG AACTCGAATC GCTGAAGCGC TTCAAGGACG ACGTGAAGGA AGTGAAGCAA
GGCTTCGAGT GCGGTATGTC GGTGAAGAAC TTCAACGACG TCATCGAAGG CGACCAGTTC
GAAGTCTTCG AAGTGACCGA AGTCGCGCGT ACGCTGTAA
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| Protein sequence | MASNNVAQFA AELKMPAGVL LEQLQAAGVQ KASEDDALSE ADKARLLDHL RKSHGATDGD
KRKITLTRKH TSEIKQSDAT GKARTIQVEV RKKRTFVKRD DVAEGAEQGQ AQVAEADDDA
ELKRREEEAR REAELLEKQA QELRERQERL EREEAERRAR EEAAEAERRR AEEEAAAKRA
AAAAVEAQQA AAQQAAEAQQ ETAGAQSAQD EARAAAERAA QREAAKKAED AAREAADKTR
AEQEEIRKRR EAAEAEARAI REMMNTPRKA VVKAVEPPKP VEPPKPVEAK GTLHKPAKPA
GAGAARPAVK KPAGAAPATT QAPAGAGDRN KKPGGGKGGW QDDAAKRRGI KTRGDSSGGV
DRGWRGGPKG RGRHQDSAST FQAPTEPIVR EVHVPETVSV ADLAHKMSIK ASEVIKVMMK
MGQMVTINQV LDQETAMIVV EELGHRAVAA KLDDPEALLV EGEATTDAEQ LPRPPVVTVM
GHVDHGKTSL LDHIRRAKVA AGEAGGITQH IGAYHVETPR GVITFLDTPG HEAFTAMRAR
GAKATDIVVL VVAADDGVMP QTKEAIAHAK AGGVPIVVAI NKIDKPEANP DRVKQELVAE
GVVPEEYGGD SPFVPVSAKT GVGIDDLLEN VLLQAEVLEL KAPIEAPAKG IVIEAKLDKG
KGPVATILVQ SGTLNRGDVV LAGSAYGRVR AMLDENGKPT KEAGPSIPVE IQGLSEVPGA
GEEVIVLPDE RKAREIALFR QGKFRDVKLA KQQAAKLESM LEQMGEGEVQ NLPLIIKADV
QGSQEALVQS LLKLSTDEVR VQIVHSAVGG ISENDVNLAT ASKAVIIGFN TRADAQARKL
AESNGIDIRY YNIIYDAVDE VKAAMSGMLA PEKREVITGM VEVRQVFKVP KIGTVAGCMV
TDGIVKRSSS VRVLRNNVVI FTGELESLKR FKDDVKEVKQ GFECGMSVKN FNDVIEGDQF
EVFEVTEVAR TL
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