| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1399 |
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| Symbol | thrS |
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| ID | 6176571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1552447 |
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| End bp | 1554354 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641681155 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001808103 |
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| Protein GI | 172060451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00532167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCGA TACGCTTGCC TGACGGCTCA GTTCGACAAT ACGAGCATCC GGTGACAGTT
GCCGAGGTTG CGGCCTCGAT CGGTCCCGGC CTCGCGAAGG CTGCGCTTGG AGGCAAGCTC
GACGGCGAGC TCGTCGACAC GTCCACGGTC ATCGATCGCG ACGCAGCGCT CGCGATCATC
ACGGACAAGG ATGCCGACGG TCTCGACATC ATCCGTCACT CGACCGCGCA CTTGCTCGCG
TACGCGGTGA AGGAACTGTA TCCGGATGCG CAAGTGACGA TCGGTCCCGT GATCGACAAC
GGCTTCTACT ACGACTTCTC GTATAACCGC CCGTTTACGC CCGAAGATCT GGAAAAGATC
GAAAAGCGCA TGCAGGAAAT CGCGAAGAAG GACGAGCCGG TGACACGCCG CGTCGTGTCG
CGCGACGAGG CGGCCGGCTA TTTCCGCAGC ATCGGCGAGA AGTACAAGGC CGAGATCATC
GAATCGATTC CGCAAACCGA CGAAATCAAG CTGTACTCGC ACGGCGGCTT CACGGATCTG
TGCCGCGGCC CGCACGTGCC GTCGACCGGC AAGCTGAAGG TCTTCAAGCT GATGAAGGTC
GCGGGCGCGT ACTGGCGCGG CGACTCGAAG AACGAGCAGC TGCAGCGCAT CTACGGTACG
GCCTGGACGA AGAAGGAAGA CCAGGATCAA TACCTGCACA TGCTCGAGGA AGCGGAAAAG
CGCGACCACC GCAAGCTCGG CAAGCAGCTC GACCTGTTCC ACATGCAGGA AGAGTCGCCG
GGCATGGTGT TCTGGCATCC GAAGGGCTGG GCGCTGTGGC AGCAGGTCGA GCAGTACATG
CGCCGCCGCG TGAACGACGC CGGCTACCTC GAGATCAAGA CGCCGATGAT CATGGACCGT
TCGCTGTGGG AAGCGTCGGG CCACTGGCAG AACTACCGCG AGAACATGTT CACGACGGAG
TCGGAGAAGC GCGACTACGC GATCAAGCCG ATGAACTGTC CGGGCCACGT TCAGGTGTTC
AAGCACGGCC TGCGCTCGTA CCGCGACCTG CCGCTGCGCT ACGCGGAATT CGGTTCGTGC
CACCGCAACG AGGCATCGGG CGCGCTGCAT GGCCTGATGC GCGTGCGCGG CTTCGTGCAG
GACGATGCGC ACATCTTCTG TACGGAGGAG CAGTTCATCG CCGAGTCGAT CGCGTTCAAT
ACGCTGGCGA TGAGCGTGTA CAAGGATTTC GGGTTCGAGC ACATCGACAT CAAGCTGTCG
CTGCGCCCCG AACAGCGTGC GGGCACGGAT GAAACGTGGG ATCGTGCCGA GCAGGGCCTG
CGCGACGCGC TGACGGCGTG CGGCCTGTCG TGGGAAGAGC TGCCGGGCGA GGGTGCGTTC
TACGGTCCGA AGATCGAGTA CCACATCAAG GATGCGCTCG GCCGTTCGTG GCAGTGCGGC
ACGCTGCAGC TCGACATGGT GCTGCCGGAG CGCCTCGGTG CCGAATACGT CGCGGAGGAC
AACAGCCGCC GCCGGCCGGT GATGCTGCAC CGTGCGATCG TCGGTTCGAT GGAGCGATTC
CTCGGCATTC TGATCGAGCA CCATGCCGGC GCGATGCCGG CCTGGCTCGC GCCGTTCCAG
GCAGTTGTGC TCAATATCGC CGAAAGTCAG GCGGAATATG CGCACTCTCT GACCCAAACG
TTGCAAAAAC AAGGGGTTAG GGTGGCGGGC GATTTGCGCA ACGAGAAGAT TAGCTATAAA
ATACGCGAGC ACACGCTGGA AAAGGTGCCT TATCTCCTCG TCGTGGGTGA TAAGGAGCGT
GATGCGCAAA CGGTAGCCGT GCGTGCCCGT GGCGGCGTCG ATCTTGGCGT TATGCCGATC
GAAGCCTTCG TTGAGCGTCT GCAGGAAGAC CTGCGCTCGT TCAAGTAA
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| Protein sequence | MVSIRLPDGS VRQYEHPVTV AEVAASIGPG LAKAALGGKL DGELVDTSTV IDRDAALAII
TDKDADGLDI IRHSTAHLLA YAVKELYPDA QVTIGPVIDN GFYYDFSYNR PFTPEDLEKI
EKRMQEIAKK DEPVTRRVVS RDEAAGYFRS IGEKYKAEII ESIPQTDEIK LYSHGGFTDL
CRGPHVPSTG KLKVFKLMKV AGAYWRGDSK NEQLQRIYGT AWTKKEDQDQ YLHMLEEAEK
RDHRKLGKQL DLFHMQEESP GMVFWHPKGW ALWQQVEQYM RRRVNDAGYL EIKTPMIMDR
SLWEASGHWQ NYRENMFTTE SEKRDYAIKP MNCPGHVQVF KHGLRSYRDL PLRYAEFGSC
HRNEASGALH GLMRVRGFVQ DDAHIFCTEE QFIAESIAFN TLAMSVYKDF GFEHIDIKLS
LRPEQRAGTD ETWDRAEQGL RDALTACGLS WEELPGEGAF YGPKIEYHIK DALGRSWQCG
TLQLDMVLPE RLGAEYVAED NSRRRPVMLH RAIVGSMERF LGILIEHHAG AMPAWLAPFQ
AVVLNIAESQ AEYAHSLTQT LQKQGVRVAG DLRNEKISYK IREHTLEKVP YLLVVGDKER
DAQTVAVRAR GGVDLGVMPI EAFVERLQED LRSFK
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