| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1387 |
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| Symbol | |
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| ID | 6177154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1541369 |
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| End bp | 1542145 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681142 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001808091 |
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| Protein GI | 172060439 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCGAT CGATCAATCT GGAAGGCAAG GTCGCGCTGG TCACGGGCGC ATCGAGCGGT
CTCGGGCAGC GCTTCGCGCA GGTGCTGTCG CAGGCCGGCG CGAAGGTCGT GCTCGCGAGC
CGCCGCGTCG AGCGCCTGAA GGAACTGCGC GCGGAGATCG AGGCGGCGGG CGGTGCCGCA
CACGTCGTGT CGCTCGACGT CACCGACGTG CAGAGCATCA AGGCGGCCAT CGCGCACGCG
GAGACGGAAG CCGGTACGAT CGACATCCTC GTGAACAATT CGGGCGTCTC GACGATGCAG
AAGCTCGTCG ACGTGACGCC GGCCGATTTC GAATTCGTGT TCGACACCAA CACCCGCGGC
GCGTTTTTCG TCGCGCAGGA AGTCGCGAAA CGGATGATGA TGCGCGCGAA CGGCAACGGC
AAGCCGCCGT ACCGGATCAT CAACATCGCG TCGGTGGCCG GCCTGCGCGT GTTTCCGCAG
ATCGGGCTGT ATGCGATGAG CAAGTCGGCG GTCGTGCAGA TGACGCGCGC GATGGCGCTC
GAATGGGGCC GCCACGGGAT CAACGTCAAC GCGATCTGTC CGGGCTATAT CGATACCGAA
ATCAATCATT ACCTGTGGGA AACCGAGCAG GGCCAGAAGC TGCAGTCGAT GCTGCCGCGC
CGGCGCGTCG GCAAGCCGCA GGATCTCGAC GGGCTGTTGT TGCTGCTCGC GGCCGACGAG
TCGCAGTTCA TCAACGGCTC GATTATCTCC GCCGACGACG GCTTCGGCCT CGCCTGA
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| Protein sequence | MGRSINLEGK VALVTGASSG LGQRFAQVLS QAGAKVVLAS RRVERLKELR AEIEAAGGAA
HVVSLDVTDV QSIKAAIAHA ETEAGTIDIL VNNSGVSTMQ KLVDVTPADF EFVFDTNTRG
AFFVAQEVAK RMMMRANGNG KPPYRIINIA SVAGLRVFPQ IGLYAMSKSA VVQMTRAMAL
EWGRHGINVN AICPGYIDTE INHYLWETEQ GQKLQSMLPR RRVGKPQDLD GLLLLLAADE
SQFINGSIIS ADDGFGLA
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