Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1366 |
Symbol | |
ID | 6177502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1517605 |
End bp | 1519281 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641681121 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001808070 |
Protein GI | 172060418 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.735429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.799433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAG CATCATTGCA TCCGCGGCCG GGTGCGGCCA CCAGCGCATC CGGTGCGGCC GCGAGGCCCG CCGCCGCACG ACGTCCGCGC GCGGCCCGGC GCGAACGCCG GCCCTGGACG GTCAAGGCGA CGTTGCGCGC GGCGTTCGCG ATCCTGCTGG CCGGCACGCT CGCGATCGGC GTGTTTTCGC TGTGGCAGAT CAGCCGGCTG AACGCGTCGA TCGCGTCGGT CTACGAGCAG GGGCACGTCG CGAGCCGCGC GGCGGAGGAA GTGCGCGCCG AGGTGCTGCG TGCGAGCCGC GCGCAGAAGA TGCTGCTGAC CGCGACCACC GCGAAGGAGC GCGACGACCT GGGCGCCGAG ATTCGCGCGG GGCTCGCGTC GATCGGCCAG GCGCTCGCGA CGCTGCAGCA TTACGCGGAT CCGGCCGATG CGGACGATTC CGCGCGCCTG CGCGCGTTCT CGATGGCGGT CGGCACGTGG AGCGGCCATC TGCGCGATTT CGTCGCGCTC GTGCAGGCGC AGCCGCTCGA TCTGTCGCAG ATGAACTGGC AGGTCGGCAC GCAGGACGTG TCGCTGCTGG TCGAGACCGC CAAGCTCGAG AAGTTGGTCG CCATGCTCGT GAAGACGCGC GGCGCGAAGT CGAAGGCGAC ACTCGATGCG TCCGCAACGA TCTTTTCATC GTCGTTCGCG ATGATCGCGG CGATGACGGC CGCGCTGTTC GTGCTGGCGA TCGTGATCGC CGAACGGGTC GTGCGCCGCC TCGCGTCGCA GCTCGGCGGC GAGCCCGCCG ATGCGAAGGC GATCGCCGCC GACATCGCGC GCGGTGACCT CACGCGGCCG ATCCCGCTCG GCCGCCACGA CCGCGACAGC ATGGTGCGTG CGCTGTCCGA CATGCAGACC GGGCTCGCGG CGACCGTCGG CGAGATCGCA GTCAGCGCCG AGGCGATCGC GGCTGCGTCC GGCGAGATCT CGACCGGCAA TCTCGACCTG TCGCGGCGTA CCGAGCAGCA GGCCGTCGCG CTCGAGCGCA CCGCGGCCAG CATGGAAGAG CTCACGTCGA CCGTGCGGCA GAACGCCGAA AACGCGCGGC AGGCGAGCGC GCTCGCAGCT AATGCGTCGG CCGTCGCGGA AGCCGGCGGC GAAGTCGTCG GGCGCGTGGT CGCGACGATG AGCGAGATCG ACGACAGCGC GAAGAACATC CGCGACATCA TCGGCACGAT CGAGGGAATC GCGTTCCAGA CCAACATCCT CGCGTTGAAC GCGGCGGTCG AGGCGGCGCG CGCGGGTGAG CAGGGCCGTG GTTTTTCGGT GGTCGCGGGC GAAGTGCGGC TGCTCGCGCA GCGGGCGGCG AGCGCGGCGA AGGAGATCCG TACGCTGATC GGCGCGTCGG TCGAGCGCGT CGCGAACGGG GCGGCGCTCG CGCACGATGC GGGCCGCACG ATGGACGACG TGGTGCGGGC GGTCAAGCGC GTGACCGACA TCATCGGCGA AATCTCCGCG GCGTCGGACG AGCAGAGCGC CGGGATCGAC GAGATCGGCC GAGCGGTGAT GCAGATGGAT TCCGGCACCC AGCAGAACGC GGCGCTCGTC GAACAGGCGG CCGCCGCGGC GAATGCGCTC GACGAGCAGG CGCAGGCGCT CAAGTCGCTG GTCGGGCGCT TTCGCATCGC GGCGTAA
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Protein sequence | MKAASLHPRP GAATSASGAA ARPAAARRPR AARRERRPWT VKATLRAAFA ILLAGTLAIG VFSLWQISRL NASIASVYEQ GHVASRAAEE VRAEVLRASR AQKMLLTATT AKERDDLGAE IRAGLASIGQ ALATLQHYAD PADADDSARL RAFSMAVGTW SGHLRDFVAL VQAQPLDLSQ MNWQVGTQDV SLLVETAKLE KLVAMLVKTR GAKSKATLDA SATIFSSSFA MIAAMTAALF VLAIVIAERV VRRLASQLGG EPADAKAIAA DIARGDLTRP IPLGRHDRDS MVRALSDMQT GLAATVGEIA VSAEAIAAAS GEISTGNLDL SRRTEQQAVA LERTAASMEE LTSTVRQNAE NARQASALAA NASAVAEAGG EVVGRVVATM SEIDDSAKNI RDIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFSVVAG EVRLLAQRAA SAAKEIRTLI GASVERVANG AALAHDAGRT MDDVVRAVKR VTDIIGEISA ASDEQSAGID EIGRAVMQMD SGTQQNAALV EQAAAAANAL DEQAQALKSL VGRFRIAA
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