Gene BamMC406_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1366 
Symbol 
ID6177502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1517605 
End bp1519281 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content71% 
IMG OID641681121 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001808070 
Protein GI172060418 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.735429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.799433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG CATCATTGCA TCCGCGGCCG GGTGCGGCCA CCAGCGCATC CGGTGCGGCC 
GCGAGGCCCG CCGCCGCACG ACGTCCGCGC GCGGCCCGGC GCGAACGCCG GCCCTGGACG
GTCAAGGCGA CGTTGCGCGC GGCGTTCGCG ATCCTGCTGG CCGGCACGCT CGCGATCGGC
GTGTTTTCGC TGTGGCAGAT CAGCCGGCTG AACGCGTCGA TCGCGTCGGT CTACGAGCAG
GGGCACGTCG CGAGCCGCGC GGCGGAGGAA GTGCGCGCCG AGGTGCTGCG TGCGAGCCGC
GCGCAGAAGA TGCTGCTGAC CGCGACCACC GCGAAGGAGC GCGACGACCT GGGCGCCGAG
ATTCGCGCGG GGCTCGCGTC GATCGGCCAG GCGCTCGCGA CGCTGCAGCA TTACGCGGAT
CCGGCCGATG CGGACGATTC CGCGCGCCTG CGCGCGTTCT CGATGGCGGT CGGCACGTGG
AGCGGCCATC TGCGCGATTT CGTCGCGCTC GTGCAGGCGC AGCCGCTCGA TCTGTCGCAG
ATGAACTGGC AGGTCGGCAC GCAGGACGTG TCGCTGCTGG TCGAGACCGC CAAGCTCGAG
AAGTTGGTCG CCATGCTCGT GAAGACGCGC GGCGCGAAGT CGAAGGCGAC ACTCGATGCG
TCCGCAACGA TCTTTTCATC GTCGTTCGCG ATGATCGCGG CGATGACGGC CGCGCTGTTC
GTGCTGGCGA TCGTGATCGC CGAACGGGTC GTGCGCCGCC TCGCGTCGCA GCTCGGCGGC
GAGCCCGCCG ATGCGAAGGC GATCGCCGCC GACATCGCGC GCGGTGACCT CACGCGGCCG
ATCCCGCTCG GCCGCCACGA CCGCGACAGC ATGGTGCGTG CGCTGTCCGA CATGCAGACC
GGGCTCGCGG CGACCGTCGG CGAGATCGCA GTCAGCGCCG AGGCGATCGC GGCTGCGTCC
GGCGAGATCT CGACCGGCAA TCTCGACCTG TCGCGGCGTA CCGAGCAGCA GGCCGTCGCG
CTCGAGCGCA CCGCGGCCAG CATGGAAGAG CTCACGTCGA CCGTGCGGCA GAACGCCGAA
AACGCGCGGC AGGCGAGCGC GCTCGCAGCT AATGCGTCGG CCGTCGCGGA AGCCGGCGGC
GAAGTCGTCG GGCGCGTGGT CGCGACGATG AGCGAGATCG ACGACAGCGC GAAGAACATC
CGCGACATCA TCGGCACGAT CGAGGGAATC GCGTTCCAGA CCAACATCCT CGCGTTGAAC
GCGGCGGTCG AGGCGGCGCG CGCGGGTGAG CAGGGCCGTG GTTTTTCGGT GGTCGCGGGC
GAAGTGCGGC TGCTCGCGCA GCGGGCGGCG AGCGCGGCGA AGGAGATCCG TACGCTGATC
GGCGCGTCGG TCGAGCGCGT CGCGAACGGG GCGGCGCTCG CGCACGATGC GGGCCGCACG
ATGGACGACG TGGTGCGGGC GGTCAAGCGC GTGACCGACA TCATCGGCGA AATCTCCGCG
GCGTCGGACG AGCAGAGCGC CGGGATCGAC GAGATCGGCC GAGCGGTGAT GCAGATGGAT
TCCGGCACCC AGCAGAACGC GGCGCTCGTC GAACAGGCGG CCGCCGCGGC GAATGCGCTC
GACGAGCAGG CGCAGGCGCT CAAGTCGCTG GTCGGGCGCT TTCGCATCGC GGCGTAA
 
Protein sequence
MKAASLHPRP GAATSASGAA ARPAAARRPR AARRERRPWT VKATLRAAFA ILLAGTLAIG 
VFSLWQISRL NASIASVYEQ GHVASRAAEE VRAEVLRASR AQKMLLTATT AKERDDLGAE
IRAGLASIGQ ALATLQHYAD PADADDSARL RAFSMAVGTW SGHLRDFVAL VQAQPLDLSQ
MNWQVGTQDV SLLVETAKLE KLVAMLVKTR GAKSKATLDA SATIFSSSFA MIAAMTAALF
VLAIVIAERV VRRLASQLGG EPADAKAIAA DIARGDLTRP IPLGRHDRDS MVRALSDMQT
GLAATVGEIA VSAEAIAAAS GEISTGNLDL SRRTEQQAVA LERTAASMEE LTSTVRQNAE
NARQASALAA NASAVAEAGG EVVGRVVATM SEIDDSAKNI RDIIGTIEGI AFQTNILALN
AAVEAARAGE QGRGFSVVAG EVRLLAQRAA SAAKEIRTLI GASVERVANG AALAHDAGRT
MDDVVRAVKR VTDIIGEISA ASDEQSAGID EIGRAVMQMD SGTQQNAALV EQAAAAANAL
DEQAQALKSL VGRFRIAA