| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1350 |
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| Symbol | |
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| ID | 6176237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1497528 |
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| End bp | 1498412 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681105 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001808054 |
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| Protein GI | 172060402 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.14159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAT CCGAGAAACC TCCCGCCACC GTCGAGGAGT TCCTGCAGCA TCTGACGCAG
GAGTACGACG GCCTCAGCAA TCGCCTGAAG GTGATTGCGC GTCACGTGGA AACGCATCGC
GACCAGCTCG GCCTGGAGGG CATCCAGTCG CTCGCGGAGG CCTGCGGCGT GCAGCCGTCG
GCCGTCGTGC GGTTCGCGAA GCATTTCGGC TTCTCCGGCT TCTCCGAGAT GCAGCGGCTG
TTCCGCGAGG GCCTGGCCCA GCAGATCGCG CCGGGCCGCG CGTACAACCT GCGGTTGCGC
GACGTGATCG AATCGGGCTC GTCGAGCCTG CAGCCCGAGC AGATCGCCGA CGAATTCATC
AAGGGCAGTA TCGCCGGGAT GCAGCAGCTG CGGCAGACGC TCGATGCGCA GGCGCTCGCG
CAGGCCGTCG ACCTGCTCGC CGACACGCAG GCAATCTGGA TCGCCGGCTC GCGCCGCGCG
TTTCCGATCG CCGTGTATCT CGACTATGCG CTGCAGCACA CCGACAAGCG CATCGGCCTG
TTCAGCGCGC TCGGCAGCAT GCATCTCGGC CAGATCCGCT CGGTGCGCGA AGGCGACGTG
ATGATCGTGA TCTCGTTCAT GCCGTATGCG GAAGAGACGG TGCAGGTCGC GCAGCAGGCC
GTGCAGCGCG GCGCGCGCCT GATCGCGATC ACCGACAGCC GAATGAGCCC ACTCGCGCGG
GAGGCCGAGG TGACGCTGAT GGTGCAGGAC AGCGCGACGT TCGGGTTTCG CGCGCTGACC
GCGACGATGG GCCTCGCGCA GAGCCTGTTC GTCGCGCTCG CGTACCGCCT CGAGCTGTCG
TACCTGCCGA CCGCCGACGG CGCGCACGGC ACGAAGGCCG GCTGA
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| Protein sequence | MSSSEKPPAT VEEFLQHLTQ EYDGLSNRLK VIARHVETHR DQLGLEGIQS LAEACGVQPS
AVVRFAKHFG FSGFSEMQRL FREGLAQQIA PGRAYNLRLR DVIESGSSSL QPEQIADEFI
KGSIAGMQQL RQTLDAQALA QAVDLLADTQ AIWIAGSRRA FPIAVYLDYA LQHTDKRIGL
FSALGSMHLG QIRSVREGDV MIVISFMPYA EETVQVAQQA VQRGARLIAI TDSRMSPLAR
EAEVTLMVQD SATFGFRALT ATMGLAQSLF VALAYRLELS YLPTADGAHG TKAG
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