| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1324 |
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| Symbol | alaS |
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| ID | 6177761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1465397 |
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| End bp | 1468021 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681081 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001808030 |
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| Protein GI | 172060378 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.632034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTG CCGAAATCCG CGAGAAATTC CTCAAATTCT TCGAATCGAA GGGCCACACG
ATCGTCCGCT CGTCGAGCCT CGTGCCCGGT AACGACCCCA CGCTGATGTT CACGAACTCG
GGCATGGTCC AGTTCAAGGA CGTGTTCCTC GGCACGGATC CGCGTCCGTA CTCGCGCGCC
ACGACGGCGC AGCGCAGCGT GCGCGCGGGC GGCAAGCACA ACGACCTCGA GAACGTCGGC
TACACGGCGC GCCACCACAC GTTCTTCGAG ATGCTCGGCA ACTTCTCGTT CGGCGACTAT
TTCAAGCACG ACGCGATCCG CTTCGCGTGG GAGCTGCTGA CCACGGTCTA CCAGCTGCCG
AAGGAAAAGC TGTGGGTTAC CGTCTACCAG GAAGACGACG AAGCCTACGA CATCTGGGCG
AAGGAAGTCG GCGTGCCGAC CGAGCGGATC ATCCGGATCG GCGACAACAA GGGCGCGCGC
TACGCGTCGG ACAACTTCTG GACGATGGGC GACACCGGCC CGTGCGGCCC ATGCACGGAA
ATCTTCTACG ACCACGGCCC GGAAGTGTGG GGCGGCCCGC CGGGGTCGCC TGAGGAAGAC
GGCGATCGCT ACATCGAGAT CTGGAACCTC GTGTTCATGC AGTTCAACCG CGACGCGCAG
GGCAACATGA CGCGCCTGCC GAAGCAGTCG GTCGACACCG GCATGGGCCT CGAGCGCCTC
GCCGCGGTGC TGCAGCACGT GCACAGCAAC TACGAGATCG ACCTGTTCCA GAACCTGATC
AAGGCCGCCG CGCGCGTGAC CGAGATCAGC GACCTCACCA ACAACTCGCT GAAGGTGATC
GCCGATCACA TCCGCGCGTG CTCGTTCCTG ATCGTCGACG GCGTGATTCC GGGCAACGAA
GGCCGCGGCT ACGTGCTGCG CCGGATCGTG CGCCGCGCGA TCCGCCACGG CTACAAGCTC
GGCCGCAAGG GCTCGTTCTT CCACAAGCTG GTGGCCGACC TCGTCGCCGA GATGGGCGCG
GCCTATCCGG AGCTGAAGGA AGCCGAGCAG CGCGTGACCG ACGTGCTGCG TCAGGAAGAA
GAGCGCTTCT TCGAAACCAT CGAGCACGGG ATGTCGATCC TCGAGGCGGC ACTCGCCGAC
GTCGAGGCAA AGGGCGGCAA GGTGCTCGAC GGCGAACTCG CGTTCAAGCT GCACGACACC
TACGGCTTCC CGCTCGACCT CACGGCCGAC GTGTGCCGCG AGCGCGGGAT GACGGTCGAC
GAGCCGGCAT TCGACGACGC GATGGCGCGC CAGCGCGAGC AGGCACGCGC GGCCGGCAAG
TTCAAGGCCA CGCAGGGCCT CGAATACACG GGCGCGAAAA CCACCTTCCA CGGTTACGAG
GAAATCGCGT TCGACGATGC GAAGGTCGTC GCGCTGTACG TCGACGGTTC GGCCGTCAAT
GAAGTGAAGG CCGGCCAGGA TGCGGTCGTC GTGCTCGACC ACACGCCGTT CTACGCGGAA
TCGGGCGGCC AGGTCGGCGA CCAGGGCGTG CTCGCGAACG CCGCGACGCG CTTCGCGGTG
GCCGACACGC TGAAGGTGCA GGCCGACGTG GTCGGCCATC ACGGCACGCT GGAGCAGGGC
ACGCTGAAGC TCGGCGACGT GCTGCGCGCG GAAATCGACG CGCACCGCCG CGCCCGCACG
CAGCGCAACC ACTCGGCCAC CCACCTGATG CACAAGGCGC TGCGTGAAGT GCTCGGCGCG
CACGTGCAGC AGAAGGGCTC GCTGGTCGAC GCCGAAAAAA CCCGTTTCGA CTTCGCGCAC
AACGCGCCGA TGACCGACGA CGAAATCCGT CGCGTCGAGC AGATCGTCAA CAACGAAATC
CTCGCGAACG CGCCGGGCAT CGTGCGCGTG ATGCCGTACG ACGAAGCGGT GAAGGGCGGC
GCGATGGCGC TGTTCGGCGA GAAGTACGGC GACGAAGTGC GCGTGCTCGA CCTCGGCTTC
TCGCGCGAAC TGTGCGGCGG CACGCACGTG CATCGCACCG GCGACATCGG CTTCTTCAAG
ATCGTCGTCG AAGGCGGCGT CGCGGCCGGC ATCCGCCGGG TCGAGGCGAT CACCGGCGAC
AACGCGGTGC GTTACGTGCA GGAGCTCGAT GCGCGCGTGA ACGAAGCCGC GGCCGCGCTG
AAGGCGCAGC CGTCGGAACT CACGCAGCGC ATCGCGCAGG TGCAGGACCA GGTGAAGTCG
CTCGAGAAGG AGCTGGGCGC GCTGAAGTCG AAGCTCGCGT CGAGCCAGGG CGACGAGCTC
GCGCAGCAGG CCACCGAAGT CGGCGGCGTG TACGTGCTGG CCGCGACGCT CGACGGCGCG
GACGCGAAGA CGCTGCGCGA GACGGTCGAC AAGCTGAAGG ACAAGCTGAA GAGCGCGGCG
ATCGTGCTGG CGGCCGTCGA AGGCGGCAAG GTCAGCCTGA TCGCGGGCGT CACGCCGGAT
GCGAGCAAGA AGGTCAAGGC CGGCGAGCTC GTGAACTTCG TCGCGCAGCA GGTCGGCGGC
AAGGGCGGCG GCCGTCCGGA CATGGCGCAG GCAGGCGGCA CGGACCCGGC GAACCTGCCG
GGCGCGCTCG CGGGCGTCAA GGGCTGGGTC GAAGAACGTC TTTGA
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| Protein sequence | MKAAEIREKF LKFFESKGHT IVRSSSLVPG NDPTLMFTNS GMVQFKDVFL GTDPRPYSRA
TTAQRSVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKHDAIRFAW ELLTTVYQLP
KEKLWVTVYQ EDDEAYDIWA KEVGVPTERI IRIGDNKGAR YASDNFWTMG DTGPCGPCTE
IFYDHGPEVW GGPPGSPEED GDRYIEIWNL VFMQFNRDAQ GNMTRLPKQS VDTGMGLERL
AAVLQHVHSN YEIDLFQNLI KAAARVTEIS DLTNNSLKVI ADHIRACSFL IVDGVIPGNE
GRGYVLRRIV RRAIRHGYKL GRKGSFFHKL VADLVAEMGA AYPELKEAEQ RVTDVLRQEE
ERFFETIEHG MSILEAALAD VEAKGGKVLD GELAFKLHDT YGFPLDLTAD VCRERGMTVD
EPAFDDAMAR QREQARAAGK FKATQGLEYT GAKTTFHGYE EIAFDDAKVV ALYVDGSAVN
EVKAGQDAVV VLDHTPFYAE SGGQVGDQGV LANAATRFAV ADTLKVQADV VGHHGTLEQG
TLKLGDVLRA EIDAHRRART QRNHSATHLM HKALREVLGA HVQQKGSLVD AEKTRFDFAH
NAPMTDDEIR RVEQIVNNEI LANAPGIVRV MPYDEAVKGG AMALFGEKYG DEVRVLDLGF
SRELCGGTHV HRTGDIGFFK IVVEGGVAAG IRRVEAITGD NAVRYVQELD ARVNEAAAAL
KAQPSELTQR IAQVQDQVKS LEKELGALKS KLASSQGDEL AQQATEVGGV YVLAATLDGA
DAKTLRETVD KLKDKLKSAA IVLAAVEGGK VSLIAGVTPD ASKKVKAGEL VNFVAQQVGG
KGGGRPDMAQ AGGTDPANLP GALAGVKGWV EERL
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