Gene BamMC406_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1318 
Symbol 
ID6177770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1461015 
End bp1461569 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content70% 
IMG OID641681075 
Producthypothetical protein 
Protein accessionYP_001808024 
Protein GI172060372 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.136684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT CCGTCGTTTT CGTCTTGCCG GGTTACGCCA ATTCGGGCCC GCTTCACTGG 
CAAAGCCGTT GGGAGCGTGT CGATCCGCGT TTCGTGCGGA TTGCGATGCC GGACTGGAAC
CATGCGTTCC GCAACGGCTG GTGTCGCGCG CTCGACGGGG CGGTCGAAGC TGCGCGCGGG
CGCGTGCTGA TCGCCGCCCA TAGTCTCGGT ACGTTGACCG CCGCATGGTG GGCGACCCGC
TATGCGCGGC CGGCCGCGCT CGCGAAAGTG CGCGGGGCAC TGCTGGTCGC GCTGCCCGAT
CCCGCCGGAC CGGCGTTTCC GGCCGACGCG CACGGCTTCG GCCCGGTGCC GCACGAGCGA
GTGCCGTTTC CGACCTGCGT CGTCGCGAGC AGCGACGATC CGTACGGTTC GCTCGCGTTC
GCACGCGATT GCGCGAAAGC ATGGGGCAGC ACGTTCCATG ACCTCGGCCC GCGCGGCCAC
ATCAACGCGG ACAGCGGGCT CGGGGAATGG CCGGAAGCGC GCGGCTGGCT CGAGGCGCTG
GGGACGACGG GCTGA
 
Protein sequence
MTDSVVFVLP GYANSGPLHW QSRWERVDPR FVRIAMPDWN HAFRNGWCRA LDGAVEAARG 
RVLIAAHSLG TLTAAWWATR YARPAALAKV RGALLVALPD PAGPAFPADA HGFGPVPHER
VPFPTCVVAS SDDPYGSLAF ARDCAKAWGS TFHDLGPRGH INADSGLGEW PEARGWLEAL
GTTG