Gene BamMC406_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1292 
Symbol 
ID6177929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1430791 
End bp1432011 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content74% 
IMG OID641681049 
Productendo-1,4-D-glucanase 
Protein accessionYP_001807998 
Protein GI172060346 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3405] Endoglucanase Y 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0452609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0578777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGG CATTCGCAAG GCGACGGGCA ACGCGGCCGG CGCGGCGCGT CGGCACGACA 
CTCGTGCTGG CCGTCGCGGC TGCGTGCGCG TCGGCCGCGA CCGCCGGGCG CGCGCAGGCG
GCGCAAAGCG GCGCGGCCGA CGCGCAGTGC GGCGCGGCGT GGCCGCGCTG GGACGCGTTC
AAGCGCGATT TCGTGTCGGC CGACGGCCGG GTGATCGACG TCGGCTCGGC CGATTCGCGC
ACGGTATCGG AGGGGCAGGC GTATGGACTG TTCTTCGCGC TGGTGGCGAA CGACCGGCGC
ACGTTCGACA CGATCCTCGC ATGGACCGAG AACAACCTCG CGCAGGGCGA CCTGAGCGCC
CGTCTGCCGG CGTGGCTGTG GGGCCGCGCG CCGGACGGCG CATGGCGCGT GCTCGATGCG
AACGCGGCGT CGGACGCCGA CCTGTGGATC GCGTACACGC TCGTCGAAGC CGGCCGGCTG
TGGCGCGAGC GCAGCTACAC GGCGCGCGGC GCGCTGCTCG CGAAGCGCGT GCTGGACGAC
GAGACGGCCA GCGTGCCGGG CCTCGGCCTC ACGCTGCTGC CCGGGCCGAC CGGCTTCAAG
CTGGCCAACG GTCAATGGCG CGTGAACCCG AGCTATTCGC CGCCGCAGTT GATCCGCGGG
CTCGCCGCGC GCCTGCCCGA CGATCGGCGC TGGGCCGCGC TCTCGGCCAG CACCGGCCGC
GTGCTGCTCG ACACCGCGCC GAAGGGCTTT TCTCCGGACT GGGCGCTGTA TCGCGCGGGC
GCCGGCTTCG GGCCCGATCC GCAAACCCGC GCGGAAAGCG CGTACAACGC GATCCGCGTG
TACTTGTGGG CCGGCATGCT CGATCGCGCC GATCCGCTCG CCGCGCCGCT GCTCGCGCGG
TTTGCACCGT TTGCCGACTA CATCGCCGCG CATGGCGCGC CGCCGGAGAA GGTCGACACG
ACGACCGGCG TCGCGGGGCC GAACGACGGC AACGGCGGCT TCTCCGCGGC GGCCGTGCCG
TTCCTCGACG CGCGCGGCCA GCGTGCGCTC GCCGATGCGC AGGCCGCGCG GGTCGATACG
CTCGCGCGCC AGTCGGCGCC CGGCTACTAC ACGAGCGTGC TGACGCTGTT CGGCCTCGGC
TGGCGCGAGG GCCGCTACCG GTTCGGCGCG GATGGATCGC TCGACGCGCG CTGGGAGGGG
CGTCCATGCG TGGCTCGATG A
 
Protein sequence
MAWAFARRRA TRPARRVGTT LVLAVAAACA SAATAGRAQA AQSGAADAQC GAAWPRWDAF 
KRDFVSADGR VIDVGSADSR TVSEGQAYGL FFALVANDRR TFDTILAWTE NNLAQGDLSA
RLPAWLWGRA PDGAWRVLDA NAASDADLWI AYTLVEAGRL WRERSYTARG ALLAKRVLDD
ETASVPGLGL TLLPGPTGFK LANGQWRVNP SYSPPQLIRG LAARLPDDRR WAALSASTGR
VLLDTAPKGF SPDWALYRAG AGFGPDPQTR AESAYNAIRV YLWAGMLDRA DPLAAPLLAR
FAPFADYIAA HGAPPEKVDT TTGVAGPNDG NGGFSAAAVP FLDARGQRAL ADAQAARVDT
LARQSAPGYY TSVLTLFGLG WREGRYRFGA DGSLDARWEG RPCVAR