Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1292 |
Symbol | |
ID | 6177929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1430791 |
End bp | 1432011 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641681049 |
Product | endo-1,4-D-glucanase |
Protein accession | YP_001807998 |
Protein GI | 172060346 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3405] Endoglucanase Y |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0452609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0578777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGGG CATTCGCAAG GCGACGGGCA ACGCGGCCGG CGCGGCGCGT CGGCACGACA CTCGTGCTGG CCGTCGCGGC TGCGTGCGCG TCGGCCGCGA CCGCCGGGCG CGCGCAGGCG GCGCAAAGCG GCGCGGCCGA CGCGCAGTGC GGCGCGGCGT GGCCGCGCTG GGACGCGTTC AAGCGCGATT TCGTGTCGGC CGACGGCCGG GTGATCGACG TCGGCTCGGC CGATTCGCGC ACGGTATCGG AGGGGCAGGC GTATGGACTG TTCTTCGCGC TGGTGGCGAA CGACCGGCGC ACGTTCGACA CGATCCTCGC ATGGACCGAG AACAACCTCG CGCAGGGCGA CCTGAGCGCC CGTCTGCCGG CGTGGCTGTG GGGCCGCGCG CCGGACGGCG CATGGCGCGT GCTCGATGCG AACGCGGCGT CGGACGCCGA CCTGTGGATC GCGTACACGC TCGTCGAAGC CGGCCGGCTG TGGCGCGAGC GCAGCTACAC GGCGCGCGGC GCGCTGCTCG CGAAGCGCGT GCTGGACGAC GAGACGGCCA GCGTGCCGGG CCTCGGCCTC ACGCTGCTGC CCGGGCCGAC CGGCTTCAAG CTGGCCAACG GTCAATGGCG CGTGAACCCG AGCTATTCGC CGCCGCAGTT GATCCGCGGG CTCGCCGCGC GCCTGCCCGA CGATCGGCGC TGGGCCGCGC TCTCGGCCAG CACCGGCCGC GTGCTGCTCG ACACCGCGCC GAAGGGCTTT TCTCCGGACT GGGCGCTGTA TCGCGCGGGC GCCGGCTTCG GGCCCGATCC GCAAACCCGC GCGGAAAGCG CGTACAACGC GATCCGCGTG TACTTGTGGG CCGGCATGCT CGATCGCGCC GATCCGCTCG CCGCGCCGCT GCTCGCGCGG TTTGCACCGT TTGCCGACTA CATCGCCGCG CATGGCGCGC CGCCGGAGAA GGTCGACACG ACGACCGGCG TCGCGGGGCC GAACGACGGC AACGGCGGCT TCTCCGCGGC GGCCGTGCCG TTCCTCGACG CGCGCGGCCA GCGTGCGCTC GCCGATGCGC AGGCCGCGCG GGTCGATACG CTCGCGCGCC AGTCGGCGCC CGGCTACTAC ACGAGCGTGC TGACGCTGTT CGGCCTCGGC TGGCGCGAGG GCCGCTACCG GTTCGGCGCG GATGGATCGC TCGACGCGCG CTGGGAGGGG CGTCCATGCG TGGCTCGATG A
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Protein sequence | MAWAFARRRA TRPARRVGTT LVLAVAAACA SAATAGRAQA AQSGAADAQC GAAWPRWDAF KRDFVSADGR VIDVGSADSR TVSEGQAYGL FFALVANDRR TFDTILAWTE NNLAQGDLSA RLPAWLWGRA PDGAWRVLDA NAASDADLWI AYTLVEAGRL WRERSYTARG ALLAKRVLDD ETASVPGLGL TLLPGPTGFK LANGQWRVNP SYSPPQLIRG LAARLPDDRR WAALSASTGR VLLDTAPKGF SPDWALYRAG AGFGPDPQTR AESAYNAIRV YLWAGMLDRA DPLAAPLLAR FAPFADYIAA HGAPPEKVDT TTGVAGPNDG NGGFSAAAVP FLDARGQRAL ADAQAARVDT LARQSAPGYY TSVLTLFGLG WREGRYRFGA DGSLDARWEG RPCVAR
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