Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1254 |
Symbol | |
ID | 6177479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1385542 |
End bp | 1387089 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681012 |
Product | ABC transporter related |
Protein accession | YP_001807961 |
Protein GI | 172060309 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTG CCGACTTGCG GCCATCGCCA CCCCTTTCGC GCGGCGGGCC GACTGCTCGA ACCATCCTGC AGCTGCAGGG CGTGGGCAAG CGCTTCCCCG GCGTCGTGGC GCTCGACGGC ATCGATCTGG ATCTACGAGC GGGAGAGGTT CATGCCGTTT GCGGCGAGAA CGGCGCGGGC AAGTCGACGC TGATGAAAAT CATCAGCGGG CAATACCGCG CGGACGACGG CGTCGTCCTC TACGACGGGG CGCCCGTGCA GTTTTCGTCC GCCACCGATG CACAAGCCGC AGGCATCGCG ATCATCCATC AGGAGCTGAA CCTGGTGCCC CACTTGTCGG TGGCGGAGAA CATTTACCTG GCACGCGAGC CGAAGCGCGG CCCGTTCGTC GACTACCGCG CGCTGAACCG CGCCGCACTG TTGTGTCTGC AACGAATCGG CTTGAACGTG TCGCCTACGA CGCTGGTCGG CGCGCTCTCG ATCGCGCAGC AGCAGATGGT GGAAATTGCG AAGGCGCTGT CACTCGACGC GCGGGTGCTC ATCATGGACG AACCCACGTC GTCGCTGACC GAATCGGAAA CAGTGCAGCT GTTTCGCATC ATCAAGGAGC TTCGCAGCGA AGGCGTCGCC ATCCTGTACA TCTCGCACCG ACTCGACGAG ATGGCCGAAA TCGTGGATCG CGTCACGGTG CTGCGCGACG GGCGCCACAT TGCCACGAGC GATTTTGCAT CGACGTCGGT GAACGAGATC GTCGCCCGAA TGGTGGGCCG TCCACTCGAC GATGCCTACC CGCCGCGCCG ATCCACGCCC ACGGATCACG TGCTGCTGAA GGTGCGCGAC CTGCAACGAA CCGGCACGTT CGGCCCCGTG TCGTTCGAAC TTCGCAAGGG TGAAATTCTC GGCTTCGCAG GGCTGATGGG TGCGGGACGC ACCGAAGTCG CCCGCGCGAT CTTCGGCGCG GAGCGGCCCG ATGCCGGCTC GATCCTGCTG GGCGATACGC CGGTCGAGAT CAACTCGCCG CGCGAGGCCA TTCGCCACGG GATTGCCTAC CTGTCCGAAG ACCGGAAAAA GGACGGCCTC GCGCTGGCGA TGCCGGTCGC CGCAAACATC ACGCTGGCCA ACGTCGCGGC GATCTCGTCG CGCGGCTTCC TGCGGTTCGC CGACGAAACG GCCATCGCCG AGCGTTACGT GCGCGAACTG GGCATCCGCA CACCGACGGT CGCGCAGATC GCGCGGAACC TGTCCGGCGG GAATCAGCAA AAGATCGTCA TCGGCAAATG GCTATACCGC GGCTCGCGCA TCCTCTTTTT CGACGAGCCG ACGCGCGGCA TCGACGTCGG CGCGAAATAC GCGATTTACG GGCTGATGGA CCGCCTGGCG GCCGATGGCG TCGGTGTCGT CCTGATCAGT TCGGAACTGC CCGAGTTGCT CGGCATGACC GATCGCATTG CCGTGTTTCA CGAAGGACGT ATCGCCGCGG TGCTTGAAAC CGGAAAGACC AATCAGGAGG AGATCTTGCA TCATGCATCA GGAAGAAGTC ATGCTTGA
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Protein sequence | MTPADLRPSP PLSRGGPTAR TILQLQGVGK RFPGVVALDG IDLDLRAGEV HAVCGENGAG KSTLMKIISG QYRADDGVVL YDGAPVQFSS ATDAQAAGIA IIHQELNLVP HLSVAENIYL AREPKRGPFV DYRALNRAAL LCLQRIGLNV SPTTLVGALS IAQQQMVEIA KALSLDARVL IMDEPTSSLT ESETVQLFRI IKELRSEGVA ILYISHRLDE MAEIVDRVTV LRDGRHIATS DFASTSVNEI VARMVGRPLD DAYPPRRSTP TDHVLLKVRD LQRTGTFGPV SFELRKGEIL GFAGLMGAGR TEVARAIFGA ERPDAGSILL GDTPVEINSP REAIRHGIAY LSEDRKKDGL ALAMPVAANI TLANVAAISS RGFLRFADET AIAERYVREL GIRTPTVAQI ARNLSGGNQQ KIVIGKWLYR GSRILFFDEP TRGIDVGAKY AIYGLMDRLA ADGVGVVLIS SELPELLGMT DRIAVFHEGR IAAVLETGKT NQEEILHHAS GRSHA
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