Gene BamMC406_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1231 
Symbol 
ID6177253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1357074 
End bp1357904 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID641680988 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001807938 
Protein GI172060286 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTCT GGTTTCTGGT ATTCCTGAGC GTCCTGCAGG GCGTTACCGA ACTCTTCCCC 
GTCAGCAGTC TCGGCCACAC GCTGCTCGTG CCGGCGTTGT TCGGCATGCA CATCGACAAG
CATGCGCCGC AGCTGCTGCC GTTCCTCGTC GCGTTGCACC TCGGCACCGC GCTCGCGCTG
CTGTGGTATT TCCGTGCGCG CTGGATCGCG CTGATCAGCG GCTTCTTCGC GCAACTCGGC
GGGCGCAAGA ACGACGACGG GCACCTGATG TGGGCGCTGA TCATCGGCAC GATCCCGACC
GGGATCGTCG GCCTGCTGCT CGAGAAGCGC CTCGAGCGCG TGTTCCACGA TCTGCGGATC
GTCGCGGTCG CGCTGATCAT CAACGGCGTG CTGCTGTGGG TCGGTGATCG CATCCAGCGC
AGTCGGGCGC ACCAGGCACC TGAGAAGATG ACGTTCAAGC AGGCGTTCTT CGTCGGCCTC
GCGCAGATCG GCGCGCTGAT TCCGGGTTTC TCGCGCAGCG GCCTGACGAT GATCGCCGGC
AATGTGGCCG GACTGACGGC GGAGAAGGCG GCGGAGTTTT CATTCCTGCT CGGCACGCCG
ATCATTTTTG CCGCGGGCGT GCTCGAGTTG CCGAAGCTCT TTCATGCGCG CGACCAGCTC
ATGGACGCGC TGCTCGGCGG CGTGCTGACG GCGATTGCCG CTTATCTGAG CGTGCGGTTT
CTGATGCGCT ATTTTGAAGG GCGCGGGCGG TTGGCTTCGT TCGGCGTGTA TTGCGTGATC
GCCGGCGTGT TCTTCCTCGG CTGGTTCATG CTGCATCCGC AGCCGGTTTG A
 
Protein sequence
MSLWFLVFLS VLQGVTELFP VSSLGHTLLV PALFGMHIDK HAPQLLPFLV ALHLGTALAL 
LWYFRARWIA LISGFFAQLG GRKNDDGHLM WALIIGTIPT GIVGLLLEKR LERVFHDLRI
VAVALIINGV LLWVGDRIQR SRAHQAPEKM TFKQAFFVGL AQIGALIPGF SRSGLTMIAG
NVAGLTAEKA AEFSFLLGTP IIFAAGVLEL PKLFHARDQL MDALLGGVLT AIAAYLSVRF
LMRYFEGRGR LASFGVYCVI AGVFFLGWFM LHPQPV