Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1215 |
Symbol | |
ID | 6177672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1342596 |
End bp | 1343603 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641680971 |
Product | rhamnose ABC transporter, periplasmic rhamnose-binding protein |
Protein accession | YP_001807922 |
Protein GI | 172060270 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.953291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA CACTGCGCAT TGCGACGACC GTCGCAGTTT GCGGCCTGTT GTTCGGAATC GGGAGTGTCG CCGGTGCAAC CGGCGTGAAG GACGGCCTGA AGATCGCGTT CGTGCCGAAG CAGATCAACA ACCCGTACGA GGTCATTGCC GACGAAGGCG GGATGGCGGC CATCAAGGAG TTCAAGGGTG ACGGAAAGGT GGTCGGCCCT TCGGACGCCG GCGCGTCGTC GCAGGTGCAG TATGTCAATA CGCTGATCAC GCAGCGACAG AATGCGATCG TGATCGCGGC AAACGATCCC AACGCGGTCG TGCCGTATCT GAAGCGCGCG ATGTCGCAGG GCATCAAGGT CGTCACGTTC GATTCCGACA CGGCGGCGGA CGGCCGCAAT ATTTTCGTCA ACCAGGCCAA TGCCGAGAGC ATCGGCCGCG GCCAGATCCA GCTCGTCGCG AAGCTGATGG GCGGGGAGGG CGAGTTCGCG ATTCTGTCGG CAACGCCGAA TGCCACCAAC CAGAACACCT GGATCAAGTG GATGCAGGAG GAATTGAAGA AGCCGGAGTA CGCGAAGATG AAGCTCGTCA AGATCGCATA CGGCAATGAC GACGACCAGA AATCGTTTGT CGAAACCCAG GGCCTGCTGC AGGCCTACCC GAACCTGAAG GCGATCGTGT CGCCGACCTC GGTCGGTATC GCCGCCGCTG CACGCTATAT CTCGACGTCG TCGAGCAAGG GCAAGGTGGC GGTGACGGGG CTCGGCACGC CGAACCAGAT GCGCGCTTTC GTGAAGAACG GCACGGTCAA GGCATTCCAG CTCTGGGATC CGGGCCAACT CGGCTACCTT GCCGCCTATG CGGCCGCCAA TCTCGCATCG GGTGCGATCT CGGGCAAGGA AGGCGAGAGT TTCGAGGCCG GCAAGCTCGG CAAGCGCACG ATCGGCAAGA GCGGAGAAGT GATCCTCGGG CCGCCCACGA CGTTCGATGC GTCCAACATC GACCAATTCA ACTTCTGA
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Protein sequence | MIKTLRIATT VAVCGLLFGI GSVAGATGVK DGLKIAFVPK QINNPYEVIA DEGGMAAIKE FKGDGKVVGP SDAGASSQVQ YVNTLITQRQ NAIVIAANDP NAVVPYLKRA MSQGIKVVTF DSDTAADGRN IFVNQANAES IGRGQIQLVA KLMGGEGEFA ILSATPNATN QNTWIKWMQE ELKKPEYAKM KLVKIAYGND DDQKSFVETQ GLLQAYPNLK AIVSPTSVGI AAAARYISTS SSKGKVAVTG LGTPNQMRAF VKNGTVKAFQ LWDPGQLGYL AAYAAANLAS GAISGKEGES FEAGKLGKRT IGKSGEVILG PPTTFDASNI DQFNF
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