Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1169 |
Symbol | |
ID | 6176618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1292088 |
End bp | 1292717 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641680925 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001807876 |
Protein GI | 172060224 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00510554 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0769479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTGA TCGGCATGCT GGATTCCCCG TTCGTGCGCC GTGTCGCCAT ATCGGCGAGG CTGCTCGACC TGCCGTTCGA ACACGAGTCG GTCTCGGTGT TCCGCCACTT CGACCGGTTC CGGACGTTCA GCCCGGTCGT GAAGGCGCCG ACGCTCGTGA CCGACGACGG CACGACGCTG ATCGATTCGT CGCTAATCGT CGATTACCTC GACCATTGCG TCGCGCCGGG GCGGCGCCTG CTGCCCGACG CCGCCGACGC GCGGCTGCGC GCGCTCGTGC CGGTCGGTTT CGCGCTGGCG GCGGCCGAGA AGACAGTGCA GGTCGTGTAC GAGCAGGCGC TGCGGCCGGC CGACAAGCAG CACGCACCGT GGCTCGAGCG GGTGCTGAGC CAGCTCGAGG CCGCGTACGG CGAACTCGAG CCGCTCGTCG CGGCCGCGAA CGGCTGGCTC GGCGGCGCGC GCCTGCTGCA GTCCGACGTG ACCGTCGCCG TCGCATGGCG TTTCACGCAG TTCATGACCG CCGATTACCC GGCGCTCGCG CGGATCGATC CGGCCCGTTA TCCGGCGCTC GCCGCGCATT CGGCGCGCGC GGAATTGCTG CCGGCGTTCG TCGAGACGCC GCTCGACTGA
|
Protein sequence | MKLIGMLDSP FVRRVAISAR LLDLPFEHES VSVFRHFDRF RTFSPVVKAP TLVTDDGTTL IDSSLIVDYL DHCVAPGRRL LPDAADARLR ALVPVGFALA AAEKTVQVVY EQALRPADKQ HAPWLERVLS QLEAAYGELE PLVAAANGWL GGARLLQSDV TVAVAWRFTQ FMTADYPALA RIDPARYPAL AAHSARAELL PAFVETPLD
|
| |