Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1159 |
Symbol | |
ID | 6176533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1282937 |
End bp | 1284583 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641680915 |
Product | malonate decarboxylase, alpha subunit |
Protein accession | YP_001807866 |
Protein GI | 172060214 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.491071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.20265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAT GGAATCACGC GCGGCAGGCG CGCGATGCAC GCCTCGCGGC CGGCGCGGCG TACGCGCAGG GCAAGCGGGT CGATGCGCGC GACACCGTCG CGTTGCTCGA AGCGGTGCTG CGGCCCGGCG ACCGCGTTTG CCTCGAAGGC GACAACCAGA AACAGGCCGA CCTGCTCGCG ACGGCGCTCG CCGACGTCGA CAACGCGAAG ATCCACGACC TGCACATGGT GCAGTCGGGC GTCGTGCTGC CCGAGCATCT CGACGTGTTC GAGCGCGGGA TCGCGAAGCG TCTCGACTTC GCGTATTCGG GCCCGCAGTC GCAGCGGATC GCGAAGCTGC TGTTCGGCGG CAAGATCGCG CTCGGCGCGG TGCACACGTA TCTCGAGCTG TTCGCTCGCT ACTTCATCGA CCTCACGCCG CAGGTCGCGC TGATCGCGGC GGTCAGTGCC GATCGTGACG GCAACCTCTA CACCGGCCCG AACACGGAAG ACACGCCGAC CGTCGTCGAG GCCACCGCGT TCAAGGACGG CATCGTGATC GCGCAGGTCG ACCGCATCGT CGACAAGGTG CCGCGCGTCG ACATTCCCGG CGACCGCGTG CATTTCGTCG TCGAGGCCGG CCGGCCGTTC TACGTCGAGC CGCTGTTCAC GCGCGACCCG GCCGCGATCA CCGAAACGCA GATCCTGACC GCGATGCTCG CGATCAAGGG CATCTACGAA CCATACGGGA TCAAGCGCCT GAACCACGGG ATCGGCTTCA ACACGGCCGC GATCGAGCTG CTGCTGCCGA CCTACGGCGC GAAGCTCGGG TTGAAGGGCA AGGTCTGCAC GCACTGGGCG CTCAATCCGC ACCCGACGCT GATCCCCGCG ATCGAGTCGG GCTGGGTCGA GCAGATTCAC TGCTTCGGTT CCGAAGTGGG GATGGACGAC TACATCCGCG CGCGCTCCGA CGTGTGGTTC ACGGGCCCCG ACGGGTCGCT GCGCTCGAAC CGCGCGTTCT GCCAGACCGC GGGACTCTAT GCGTGCGACA TGTTCATCGG CTCGACGCTG CAGATCGACC TGGCGGGCCA TTCGTCGACG GTCACGGCCG AGCGGATCGC CGGCTTCGGC GGCGCGCCGA ACATGGGCAG CGACGCGCGC GGCCGGCGTC ATCCGAGCGA GCCGTGGCTG AAGGCCGGCG CGCAAGCCGA CCCCGACACG CCGGCGGCGC TCAGGCGCGG CCGCAAGCTG GTCGTGCAGA TCGGCGAGAC GTTCGGCGAC AAGAACGTGC CGATGTTCGT CGAGAAGCTC GACGCGCTGA AGCTCGCCGA CAAGCTGCAG CTCGACCTCG CGCCGATCAT GGTCTACGGC GACGACGTCA CGCACATCGT CACCGAGGAA GGGATCGCGA ACCTGCTGAT GTGCCGCGAC AAGGATGAGC GCGAGCACGC GATCCGCGGC GTGGCCGGGT ATACCGAGGT CGGCCGCGGC CGCGACCGCC GGATGGTCGA GCGGCTGCGC GAGCGCGGCG TGATCCGGCG TCCGGAGGAT CTCGGCATCG ATCCGCTCGA TGCCGACCGC CGCTGGCTTG CCGCGCGTTC GATCAAGGAT CTCGTGCACT GGTCGGGCGG CCTCTATGCG CCGCCGGCCC GGTTCCGCAA CTGGTGA
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Protein sequence | MTGWNHARQA RDARLAAGAA YAQGKRVDAR DTVALLEAVL RPGDRVCLEG DNQKQADLLA TALADVDNAK IHDLHMVQSG VVLPEHLDVF ERGIAKRLDF AYSGPQSQRI AKLLFGGKIA LGAVHTYLEL FARYFIDLTP QVALIAAVSA DRDGNLYTGP NTEDTPTVVE ATAFKDGIVI AQVDRIVDKV PRVDIPGDRV HFVVEAGRPF YVEPLFTRDP AAITETQILT AMLAIKGIYE PYGIKRLNHG IGFNTAAIEL LLPTYGAKLG LKGKVCTHWA LNPHPTLIPA IESGWVEQIH CFGSEVGMDD YIRARSDVWF TGPDGSLRSN RAFCQTAGLY ACDMFIGSTL QIDLAGHSST VTAERIAGFG GAPNMGSDAR GRRHPSEPWL KAGAQADPDT PAALRRGRKL VVQIGETFGD KNVPMFVEKL DALKLADKLQ LDLAPIMVYG DDVTHIVTEE GIANLLMCRD KDEREHAIRG VAGYTEVGRG RDRRMVERLR ERGVIRRPED LGIDPLDADR RWLAARSIKD LVHWSGGLYA PPARFRNW
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