Gene BamMC406_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1158 
Symbol 
ID6177403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1282004 
End bp1282771 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content70% 
IMG OID641680914 
Productmalonate transporter, MadM subunit 
Protein accessionYP_001807865 
Protein GI172060213 
COG category 
COG ID 
TIGRFAM ID[TIGR00808] malonate transporter, MadM subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.155363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGA TGCTCGAAAA AACCGTCGCC CACAACGGGC TCGTCGCGTC GTTCGCGCTG 
GTCGGCCTGA TCATGTGGGT GTCGTCGATC GCGTCGCGCA AGCTCACGTT CGGCCGCGTA
CACGGCTCCG CGATCGCGAT CGTGATCGGC CTTGTGCTCG CCTATGTCGG CGGCGCGTTC
ACCGGCGGCG AGAAGGGGCT CGCCGACGTG CGGCTGTTCG CCGGTGTCGG CCTGATGGGC
GGCGCGATGC TGCGCGATTT CGCGATCGTC GCGACCGCGT TCGAAGTGCA GCCGACCGAG
GCGCGCAAGG CCGGCCTCGT CGGCGTCGTG TCGCTGCTGC TCGGCACCGT GCTGCCGTTC
ATCGTCGGCG CGAGCATCGC GCGCGCGTTC GGCTACACCG ATGCGGTCAG CATGACGACC
ATCGGCGCGG GCGCCGTCAC CTACATCGTC GGCCCCGTCA CGGGCGCGGC GATCGGCGCG
AGCTCCGACG TGATCGCGCT CAGCATCGCG ACGGGGCTGG TCAAGGCGAT CATCGTGATG
GTCGGCACGC CGGTCGCGGC CAACTTCATG GGCCTGAAGA CGCCACGCTC CGCGATGATC
TTCGGCGGCC TCGCCGGCAC CGTCAGCGGC GTGAGCGCGG GCCTCGCCGC GACCGACCGC
CGGCTCGTGC CGTATGGCGC GCTGGTCGCG ACGTTCCATA CGGGCGTCGG CTGCCTGCTC
GGCCCGTCGC TGCTGTTCTT CACGACGCGC GCGCTGGTCG GCGCATAG
 
Protein sequence
MLQMLEKTVA HNGLVASFAL VGLIMWVSSI ASRKLTFGRV HGSAIAIVIG LVLAYVGGAF 
TGGEKGLADV RLFAGVGLMG GAMLRDFAIV ATAFEVQPTE ARKAGLVGVV SLLLGTVLPF
IVGASIARAF GYTDAVSMTT IGAGAVTYIV GPVTGAAIGA SSDVIALSIA TGLVKAIIVM
VGTPVAANFM GLKTPRSAMI FGGLAGTVSG VSAGLAATDR RLVPYGALVA TFHTGVGCLL
GPSLLFFTTR ALVGA